Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0814 ATGGAGTTTGATCCATGCTTCCTTTCAGGTATTTTTCCCAAAAACCCCTACTTGAAGCCACACACTCATCAAAACATGTTTCCATCCCAAAGCTCCTTTCTTATCCCACCATCCCAACCCATCATGTTTCACCCTAACCATGCTTTCTACCATTTTCAAAACCACATCGTGAATGTGCCTGCCCACAACCCCATCACAGCCCCCATGTATGGTAATGGGATACCAACCCCTTCTTTGGGGCATGATGGGTCTTCCCTAACAGGCTTTGTTAACATTAACAGTCACCAGCCTGTAATGTTAGCACCAAAGAACAACAACAAAATTGAAGCTTTGTATGACCACCATAAAGGCAAAGTCATATGGGACTTTTCCCAGAAAAGCATGGTTCATCCCTTTGAAGCCTCTTCTTCCAAATCGCCATCTCCTTTCAGTCTCTCTAATGAGTATGGATTGGGTATGAGTGGATTTCACAGGGACACTGATCCAAGGATGGTAGAGGTGGAAAAGAATATGAACAGTAATATAATCAAAGGGCAGTGGACTCCCGAAGAAGACAGTGCTCTTGTGGAATTGGTGAATCAATTTGGGCCAAAGAAATGGTCAGAAATTGCAAAGCTGATGTGCCGTAGAGTTGGAAAGCAATGTCGAGAAAGATGGCACAATCATCTCCGGCCAAACATTAGGATTGAAGTTTAA 696 0.4353 MEFDPCFLSGIFPKNPYLKPHTHQNMFPSQSSFLIPPSQPIMFHPNHAFYHFQNHIVNVPAHNPITAPMYGNGIPTPSLGHDGSSLTGFVNINSHQPVMLAPKNNNKIEALYDHHKGKVIWDFSQKSMVHPFEASSSKSPSPFSLSNEYGLGMSGFHRDTDPRMVEVEKNMNSNIIKGQWTPEEDSALVELVNQFGPKKWSEIAKLMCRRVGKQCRERWHNHLRPNIRIEV* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0814 231 Pfam Myb-like DNA-binding domain 177 223 IPR001005 -
Pvu10g0814 231 CDD SANT 180 223 IPR001005 -
Pvu10g0814 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 172 227 IPR017930 -
Pvu10g0814 231 PANTHER MYB PROTEIN-RELATED 159 227 - -
Pvu10g0814 231 ProSiteProfiles Myb-like domain profile. 172 223 IPR001005 -
Pvu10g0814 231 SUPERFAMILY Homeodomain-like 171 227 IPR009057 -
Pvu10g0814 231 PANTHER MYB DOMAIN PROTEIN 100-RELATED 159 227 - -
Pvu10g0814 231 SMART sant 176 225 IPR001005 -
Pvu10g0814 231 Gene3D - 176 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0814 Pvu-Chr10 26711849 26712965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0814 173 231 MYB Transcription Factor Family AT4G18770 59.322 7.39e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu10g0814 Myb_DNA-binding 3.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0814 - K09422 pvu:PHAVU_010G078300g 491.5