Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0785 ATGAGAGAGAAGAGGAGAACGCGATCGGCGATGATGGGCGGTGGCGGAGAACGCGAGCGCGACAACGGTGTCGGTGGAGTTATACGGTTAAAAAAGTTAGGGCAAACAACATGCCGTGCTAGGGTACGAGGCAGCTTGACGGCGGCCTCCGATGCAGCAATCCACCGAGTTGTGCGGCGACGCAACCCAATCCGCTCCGACGTTGATCCGCCATTCAAGTCACCTCGGTTTGGCCTCCGAACTCGCTGCATTAAACTACGAGGTGTCATCTATTTGATCGTATCATGCCACTCTCGTATAGATGAGGAGGACAGAATCATAGTTGCTGCTCATGCAATCCATGGGAACAAATGGGCAGCCATTGCCAGGCTTCTACCTGGAAGAACGGATAATGCCATTAAGAACCACTGGAATTCCACTCTGAGGCGTCGGGGAGTTGAACTTGATAAGATAAAATTAGAATCTGGTAACTTTATGGAAGATGCTAGCTTGGAGAAAGCAAAAGCATCCTCGGAAGACACTCTATCATGTGGGGATGTTTCTTTGAAATCCTCAGAAGGGAGAGATGTCAGTTCTGTGGAGATCATGGATGATAAATCTGATGGTAAAGCACAAGCTGAGGGCCAATTACACCACAAAGTCAAGGATCCACCTACCCTTTTTCGGCCAGTAGCTCGTGTAAGTGCTTTCAACGTTTATCACTCGTATGATGTTATACAACCCTCAACATCAATTCAAAGACCTGTCCCGATGCAAGGACCCATTTTACAATCTTCAAGACCAGATATGGAATTTTGTAGAATGCTTGAAGGAATTTGTGGTGACCAGGCAGTACCTCACCAGTGTGGCCATGGTTGCTGTGCTGCTCCAAATGGTAGAAAGTCCGAAAGCTCTTTGTTGGGACCGGAATTCATTGAATTTTCCGAACCCCCATCTTTTCCAAATTTTGAGTTGGCTGCAATCGCTGCAGACATCAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAATAGTAGTGTGAAAATTATGGGAAACACCTCTGGCAGTGCAATGTCTAATGGATCTCGAGTACATATTGGCCATTAG 1086 0.4715 MREKRRTRSAMMGGGGERERDNGVGGVIRLKKLGQTTCRARVRGSLTAASDAAIHRVVRRRNPIRSDVDPPFKSPRFGLRTRCIKLRGVIYLIVSCHSRIDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVELDKIKLESGNFMEDASLEKAKASSEDTLSCGDVSLKSSEGRDVSSVEIMDDKSDGKAQAEGQLHHKVKDPPTLFRPVARVSAFNVYHSYDVIQPSTSIQRPVPMQGPILQSSRPDMEFCRMLEGICGDQAVPHQCGHGCCAAPNGRKSESSLLGPEFIEFSEPPSFPNFELAAIAADISNLAWLKSGLENSSVKIMGNTSGSAMSNGSRVHIGH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0785 361 PANTHER - 99 338 - -
Pvu10g0785 361 MobiDBLite consensus disorder prediction 1 15 - -
Pvu10g0785 361 CDD SANT 101 141 IPR001005 -
Pvu10g0785 361 SUPERFAMILY Homeodomain-like 101 143 IPR009057 -
Pvu10g0785 361 MobiDBLite consensus disorder prediction 1 22 - -
Pvu10g0785 361 ProSiteProfiles Myb-like domain profile. 101 141 IPR001005 -
Pvu10g0785 361 PANTHER MYB PROTEIN-RELATED 99 338 - -
Pvu10g0785 361 SMART sant 101 143 IPR001005 -
Pvu10g0785 361 Pfam Myb-like DNA-binding domain 102 140 IPR001005 -
Pvu10g0785 361 Gene3D - 100 144 - -
Pvu10g0785 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 145 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0785 Pvu-Chr10 23393634 23396240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0785 39 361 MYB Transcription Factor Family AT3G09230 42.136 6.75e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu10g0785 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0785 K09422 - gmx:100811740 475.322