Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0783 ATGGGGGCTCGTTGCTCTAAATTCTCTTTCTGCTGGTTCCACTCCCACCTCAAGCCTTCTGTCCTTGAGTCCTCTGACCAAGAAAATGGTGAGAAGGGTGAGAGAAAATTGTGGCCTAGTTTTGGTGAGTTCAGTTTAGAGCAACTGAAGGCTGCCACAAATGGGTTCTCCTCAGAAAACATAGTGTCTGAGCATGGTGAGAAAGCACCCAATGTTGTATACAAAGGAAAGCTTGATAATGGACAATGGATCGCCATCAAACGTTTCAACAAGTTTGCTTGGCCTGATTCTCGCCAATTCCTAGAGGAAGCCAAACAAGTGGGGAGCCTTAGAAGCGAACGCCTAGCAAATTTAATTGGTTATTGCTATGAAGGGGAAGAGAGGCTGCTAGTAGCAGAGTTTATGCCACATGAAACTCTGGCCAAGCATCTCTTTCATTGGGAGGCACAGCCAATGAAGTGGGCCATGAGGTTGAGGGTGGCTTTCTACTTAGCTCAAGCTCTAGAATACTGCACTAGTAAAGGAAGGGGCTTGTATCATGATCTGAATGCCTACAGGATCTTGTTTGATCAGGATGCTAATCCCAGGTTGTCTTGCTTTGGACTGATGAAGAACAGCAGAGATGGCAAGAGTTACAGCACAAACTTGGCTTTCACCCCTCCTGAGTACTTACGGACTGGTAGAGTGACCCCAGAGAGCGTGGTTTACAGTTTTGGAACTCTGCTGCTAGATCTCTTGAGTGGTAAACATATTCCACCAAGCCACGCACTTGATCTGATTCGTGGCAAAAACTTTCTGATGTTGATGGATTCTGCCTTAGAGGGTCACTTTTCAAAGGATGATGGAACTGAGTTGGTTCGTTTGGCTTCTCGTTGTTTGCAATATGAAGCTCGTGAGAGGCCAAATGCGAAGTCTCTGGTTACGTCTCTTATGTCACTTCAGAAAGAAACAGAGGTCCCCTCTTATGTTCTGATGGGTCTCAGGCAAGAAAGTGCATCCTCAACAAAGCAATTGTCATTAACACCTTTTGGTGAAGCTTGTTTGAGACTTGATCTTACTGCAATCCATGAAATATTGGAGAAGACTGGTTACAAGGACGATGAAGGAATTGCCAATGAGCTTTCCTTTCAATTGTGGACCAGCCAAATGCAGGAAACCTTGAATTTGAAGAAGCATGGTGATACTGCTTTTCGAGCTAAAGACTTTGTCACTGCCATTGACTGCTACACTCAATTCATAGAAGGAGGGACCATGGTGTCACCAACAGTGTATGCAAGGAGATGCTTATCTTATTTGATGAATGAGATGGCACAAGAAGCTCTTGGGGATGCCATGCAAGCCCAAGTGGTATCTCCTGAGTGGCCTACTGCTTTGTATCTTCAAGCAGCTTGTCTTTTCAGCCTTGGAATGGAGAATGATGCTCAAGAGACTCTCAAAGATGGGACTAACATGGAAGCCAGAAAAAACAAAAGCTGA 1476 0.4499 MGARCSKFSFCWFHSHLKPSVLESSDQENGEKGERKLWPSFGEFSLEQLKAATNGFSSENIVSEHGEKAPNVVYKGKLDNGQWIAIKRFNKFAWPDSRQFLEEAKQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVTSLMSLQKETEVPSYVLMGLRQESASSTKQLSLTPFGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIEGGTMVSPTVYARRCLSYLMNEMAQEALGDAMQAQVVSPEWPTALYLQAACLFSLGMENDAQETLKDGTNMEARKNKS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0783 491 SUPERFAMILY TPR-like 387 480 IPR011990 GO:0005515
Pvu10g0783 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 - -
Pvu10g0783 491 SUPERFAMILY Protein kinase-like (PK-like) 37 320 IPR011009 -
Pvu10g0783 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Pvu10g0783 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Pvu10g0783 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
Pvu10g0783 491 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
Pvu10g0783 491 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Pvu10g0783 491 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0783 Pvu-Chr10 23341467 23345863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0783 19 310 Glycoside Hydrolase AT3G07070 33.438 1.28e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pvu10g0783 PK_Tyr_Ser-Thr 1.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0783 - - gmx:100814477 981.859