Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0782 ATGACACTAAAGGCTCTTCTTTCGGGATGCTCCGTGGGTGGCCTGGCAGCTATTATTCATTGTGATGAATTTTGTGGACTCTTTCCAATGACCAGAAGAGTGAAATGTCTAAGTGATGCTGGGTTATTTCTTTATGCGATTGACGTATCTGGTGGGCGTACCCTCAGGAATTTATACGGCGATGTTGTAGGATTGCAGTGCTTCTTTCCTCAAAACTTGATTGCCAGTGTTAAGACCACGCTATTCATTCTTAATGCTGATTATGATTCATGGCAGGTAATTTTTTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTGCACCACAAATCCAATATCTGCAAGGATTCAGGATTCACATGCTGAATGTTATTAAAGACTTAGCAAGAGCAAACCAAAATGGCTTGTTTATTAATTCATGTTTTTCTCACAGCCAAAGTGAGAGGCAGGATACATGGTTTGCAGACAATTCTCCTATTATTAGGAACAAGATATTGATGAATATGCATGATATCGCTCTGGCTGTTGGAGATTGGTATTTCGATCGAGCAGGTGTTAAGGTCATTGATTGTCCTTACCCTTGTGACAATACGTCCCATCATCTTATTTTTAACAACTTTTGA 627 0.3907 MTLKALLSGCSVGGLAAIIHCDEFCGLFPMTRRVKCLSDAGLFLYAIDVSGGRTLRNLYGDVVGLQCFFPQNLIASVKTTLFILNADYDSWQVIFYWHDCRLNHAKCTAPQIQYLQGFRIHMLNVIKDLARANQNGLFINSCFSHSQSERQDTWFADNSPIIRNKILMNMHDIALAVGDWYFDRAGVKVIDCPYPCDNTSHHLIFNNF* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0782 208 PANTHER NOTUM-RELATED 4 206 IPR004963 GO:0016787
Pvu10g0782 208 PANTHER PECTIN ACETYLESTERASE 2 4 206 - -
Pvu10g0782 208 Pfam Pectinacetylesterase 66 185 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0782 Pvu-Chr10 23311337 23313914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0782 4 205 Carbohydrate Esterase AT1G57590 58.009 6.25e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0782 K19882 - pvu:PHAVU_010G075200g 441.425