Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0760 ATGGACATGATGGACGAGGATGAAACTTCTGCACCCAGAGAGGGGAAGCCCGTTTTGGTGATCCTGGTTGGAGCACCTGGAAGTGGCAAATCCACCTTCGGTGAAGATGTAATGCGTTCCTCTACTCGCCACTGGGTTCGCGTTTGCCAGGACACTATTGGAAATGGTAAAGCAGGAACTAAAGCTCAATGCCTAAGCAGTGCAACTAGTGCGTTGAAGGATGGGAAGAGTGTATTTATTGATAGGTGCAATCTTAACAGAGAACAGCGGTCAGAATTTATAAAGCTTGATGGTGGACTCCAAATAGATGTCCATGCAGTTGTACTTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCAGTCAAACGAACTGGGCATGAAGGAAATTTACAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAACATAAAGAACTTCCCAAATTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAGAATGAGAATGATGTAAAAAATGCTATTAATACATACAGCTCACTTGGGCCGCTGGATAGTCTTTCACATGGCTGCTTTGGTCAGAAGAATACAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCACTTACTGCTACATCTACAACGAGAAGCACTGAAGACCCTACTTCCCAGACTCTAAGGAAAAATAATTCCTACTGCAAAGATAAGGAAACACTTTCCTCAATTTTAGATAATGCCAACTTAGAGTCAAAGGAAGTAGAAGGCCAAGAAGTTGGCTCTGCTGGTTACCATGCCGATCAAGTTTGTCTGGATGATATTTCCACTTTGGCATTTCCCTCTATTTCAACATCTGATTTCCAATTCAACCTTGAGAAGGCAGCTGATATTATTATCGAGAAGGTTGTGGAGTTCTCAAATAAGTTTAGGAATGCCAGACTTGTTCTTGTTGACTTGTCTCACAAGTCAAAGATTCTTTCCTTAGTTAAAGCCAGAGTCGTGGAAAAAAACATGGACACCCAAAGGTTTTTTACCCATGTTGGGGACATTACTCATCTTTATTCCAGGGGAGGTTTGCGATGTAATGCCATTGCTAATGCTGCCAACTGGAGGTTGAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAATGCTGCAGGTCCAGAACTGGAGTCTGCAACAAAAGAAAAAGTAAAATCTCTTTCGCCTGGGAATGCTGCTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTATCTAAATAATGATTATAGTAAAGGCTGCAAAATTCTCCAAGATGCTTATACTTCACTTTTTGAAGGTTTTGCATCTATTGTGATGAACCAGCCAGGGATACCAGTGGGAAAAAGTGAAAACCTTGAAAGGAAGTCTTTGGAGTTGCCGGTTCGGTCTGATTGTTCTTCCAGAAAATATTTTACTAGTGATCAAAAGAGTAAGAGAGGTCATGATCATGGATCAGAGAAAAGCAAGAAATGCAAGGGAAATCATGATGGCTTAGGATTGGCCTTTACTAATTCTAAGGATGAAAAGGTAGATTCAGAGCATACAAGAACTGAGAGGAGCAGAAGTAAGGCTTGGGGATCATGGACTCAAGCTCTTCACCAAATAGCTATGCATCCTCAACAGCAAAAGGGTGACTTACTTGAAATTTCCGATGATGTTGTTGTATTGAATGATATGTATCCAAAGGCACAGAAGCATGTTCTGGTGTTGGCACGAATTGGGGGTCTTGACTGCCTCGCTGATGTCCAAAAGGAGCACCTTCAGTTATTGAACAAGATGCATGATGTGGGTTTAAAGTGGGCAGAGAAGTTCTTGAACGAGAATGCTTCTCTGGTATTTCGACTTGGATATCACTCGGCACCATCAATGCGACAACTACATTTACATGTTATTAGCCAGGACTTTGAATCAACACAATTAAAGAATAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGTGACTCGGTTGATGTAATGGATGAGATCTCTAGTGATGGGAAGGCAACATTGAAAGATGATGACAAGCTACTCTCCATGGAGTTGAGGTGCCACAGATGTAGAAGTGCCCATCCAAACATACCCCGGTTAAAATCTCATATCAGCAGCTGTCAATCCCCCTTTCCTGCTTACCTACTTCAGAATGGACGTTTAGTGAATGCTCCGGGGGAACCTCGCAACAGTGTCCCGTAG 2295 0.4205 MDMMDEDETSAPREGKPVLVILVGAPGSGKSTFGEDVMRSSTRHWVRVCQDTIGNGKAGTKAQCLSSATSALKDGKSVFIDRCNLNREQRSEFIKLDGGLQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQHKELPKLSEGFNRITFCQNENDVKNAINTYSSLGPLDSLSHGCFGQKNTDSKIQVGIMKFLKKAEVPLTATSTTRSTEDPTSQTLRKNNSYCKDKETLSSILDNANLESKEVEGQEVGSAGYHADQVCLDDISTLAFPSISTSDFQFNLEKAADIIIEKVVEFSNKFRNARLVLVDLSHKSKILSLVKARVVEKNMDTQRFFTHVGDITHLYSRGGLRCNAIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKVKSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNYLNNDYSKGCKILQDAYTSLFEGFASIVMNQPGIPVGKSENLERKSLELPVRSDCSSRKYFTSDQKSKRGHDHGSEKSKKCKGNHDGLGLAFTNSKDEKVDSEHTRTERSRSKAWGSWTQALHQIAMHPQQQKGDLLEISDDVVVLNDMYPKAQKHVLVLARIGGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNENASLVFRLGYHSAPSMRQLHLHVISQDFESTQLKNKKHWNSFNTAFFRDSVDVMDEISSDGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQSPFPAYLLQNGRLVNAPGEPRNSVP* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0760 764 SUPERFAMILY Macro domain-like 275 320 IPR043472 -
Pvu10g0760 764 Gene3D - 560 741 IPR036265 -
Pvu10g0760 764 Gene3D - 2 176 IPR027417 -
Pvu10g0760 764 ProSitePatterns HIT domain signature. 647 665 IPR019808 -
Pvu10g0760 764 Pfam AAA domain 19 145 - -
Pvu10g0760 764 Gene3D Leucine Aminopeptidase, subunit E, domain 1 324 473 IPR043472 -
Pvu10g0760 764 MobiDBLite consensus disorder prediction 539 554 - -
Pvu10g0760 764 Pfam Macro domain 367 450 IPR002589 -
Pvu10g0760 764 SUPERFAMILY HIT-like 558 722 IPR036265 -
Pvu10g0760 764 Gene3D Leucine Aminopeptidase, subunit E, domain 1 225 323 IPR043472 -
Pvu10g0760 764 ProSiteProfiles Macro domain profile. 332 512 IPR002589 -
Pvu10g0760 764 Pfam Scavenger mRNA decapping enzyme C-term binding 571 678 - -
Pvu10g0760 764 MobiDBLite consensus disorder prediction 502 527 - -
Pvu10g0760 764 MobiDBLite consensus disorder prediction 501 555 - -
Pvu10g0760 764 PANTHER APRATAXIN 16 757 IPR026963 GO:0003677|GO:0006281|GO:0033699
Pvu10g0760 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 163 IPR027417 -
Pvu10g0760 764 PANTHER APRATAXIN-RELATED 16 757 - -
Pvu10g0760 764 Pfam C2HE / C2H2 / C2HC zinc-binding finger 683 736 IPR032566 -
Pvu10g0760 764 SUPERFAMILY Macro domain-like 325 472 IPR043472 -
Pvu10g0760 764 SMART YBR022w_8 344 486 IPR002589 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0760 14 753 C2H2 Transcription Factor Family AT5G01310 59.054 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0760 K10863 - gmx:100786762 1289.25