Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0728 ATGGGGTGTTTCACTGTCCTGAAATACAAGAAGGAAAAGAGCAATAAAATCCGATACACAAAATGTGTCAGCCATAGTAAACATGTTCCTACAGTACTACCTGAACCTCAAACTCATACTCGTTCCCTGCAATCTGCACCTTCTAGTTTTAGGAATAGAGTGAAATCCATTCATCCCATTAATAAAGTTACCAATTACAGAACGCGGGCATTATCTGCTCCATCAGCTCTTGATGTGGCCAGACAAGATACACTTACCATAGTCGAGTTCAAGGATCAAGAGGAATCAAGATACAGTGTGGGATCACTGAAGGGGCAGCATTTATCTAAACCACAACCTTTACCACTTCCATCACTCCAGGGTGGTGGTGAATTGAAAGCTACTAGCAACTTTAAGTCAGGAATAGCTAGTGGTTCTCTGCATGCTCCTGATGCAGCAGAACAGGATGCTTTGGCCTCATTTGAGTATGAGGATCAAGAAGAGTCAAAACACCGAGTTGGATTGGTGAAGGATCATTGTTCAACTAATTCACAACCTTTGCCTCTTCCATCTCGTCAGGGTGGTGCTGCTGCATTGAAGGCTAATGTCAGCTTTAAGTCGGGAATGGCTACTGCTCCTATACATGCTTGCGGACCTTTGCCTCTTCCACCTACTGGGTTGCTTAGAAACTTAACGTTTGAGGAGATTGCTGCTGCTTGTCACAACTTCTCTTCAGATCGATGCATGTCTGAATGTCTTTCTTCTACCATATATAGCGCTTCATTTGGTGATGATGCTTCAAATGCAAAGAAGTTTGAAGCCACTGTCACCCGCCTTCATTTGTCAACTCAGGGACTGAAGGAATTCATAAATGATGTTAATACCCTTGCATCGTTGCAACATCCAAACCTATGTAAATTGCTAGGATTTCATGCGCGTGATGGTTCTGAACCAAGAATGTTGGTTTATGAGAGGCTATACTATGGAAGCTTGGACCACCAGTTGTTTGGGAGATCTGATGGCCCTTCAATTGATTGGAACTCACGAATGAAAGTTGCCATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAGCAGCCAACATTCAGATTGACAAAGATTTCAGTGCAAAGCTTTCTGGGTATGGTTGTGTTGGACGAATTCCCGAGGAAGAGATTTCCAGCAGTTCATGTGCTGTAGGAAACCTGTCAGTGGAGACATTGGAAAGAGGAATTCTTACTCCAAAGAGCTATGTTTGGGGCTTTGGAATTATTCTTTTGGAGCTACTTACTGGCAGAAAGAATGTTGATAGTCATCACCCCAAGGAAGAGAGAAACTTGGTCAAGTGGAGCCGGCCTTTCCTGGCGGATGATTTTCGGCTGTCGCTGATTATGGATCATCAACTTAAAGGTCGGTATCCTCCCAAGGCAGCAAGAGCAGTAGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCGTCAGAAAGACCCCCCATGAGAACCATTGTTGAACATCTCAAAGTGGTTCAAGATATGAAGTACTCATGTTGGTTCCCACTGCAAGAACCAGCAAAACAAATGTCAAGATCGCCAAGTCTTAATGGTATCAAATGTCTCACACCTACATTGAGTTTCTCTCCCGCAGCAGCACTAGTAGCCAGACCATCAGTTTCATCTCCAAGATGGTGTGCTGTGCCCACATTGCATCTTCCTCTTGGCGCTTGTTCCTCCACTTTCTCCATCGACGAGCTTGGTAGGCCGGAAACCCGGAAGTCATCATCCTCATTGTGTAGGAGAGCCAGTGTTGAAGGATATTGA 1833 0.4441 MGCFTVLKYKKEKSNKIRYTKCVSHSKHVPTVLPEPQTHTRSLQSAPSSFRNRVKSIHPINKVTNYRTRALSAPSALDVARQDTLTIVEFKDQEESRYSVGSLKGQHLSKPQPLPLPSLQGGGELKATSNFKSGIASGSLHAPDAAEQDALASFEYEDQEESKHRVGLVKDHCSTNSQPLPLPSRQGGAAALKANVSFKSGMATAPIHACGPLPLPPTGLLRNLTFEEIAAACHNFSSDRCMSECLSSTIYSASFGDDASNAKKFEATVTRLHLSTQGLKEFINDVNTLASLQHPNLCKLLGFHARDGSEPRMLVYERLYYGSLDHQLFGRSDGPSIDWNSRMKVAICAAQGLTFLHEEGPFQAMYNEFSAANIQIDKDFSAKLSGYGCVGRIPEEEISSSSCAVGNLSVETLERGILTPKSYVWGFGIILLELLTGRKNVDSHHPKEERNLVKWSRPFLADDFRLSLIMDHQLKGRYPPKAARAVADIAQRCLQKEPSERPPMRTIVEHLKVVQDMKYSCWFPLQEPAKQMSRSPSLNGIKCLTPTLSFSPAAALVARPSVSSPRWCAVPTLHLPLGACSSTFSIDELGRPETRKSSSSLCRRASVEGY* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0728 610 Pfam Protein tyrosine and serine/threonine kinase 266 511 IPR001245 GO:0004672|GO:0006468
Pvu10g0728 610 Gene3D Transferase(Phosphotransferase) domain 1 320 522 - -
Pvu10g0728 610 MobiDBLite consensus disorder prediction 30 51 - -
Pvu10g0728 610 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 47 603 - -
Pvu10g0728 610 MobiDBLite consensus disorder prediction 102 123 - -
Pvu10g0728 610 MobiDBLite consensus disorder prediction 31 51 - -
Pvu10g0728 610 Gene3D Phosphorylase Kinase; domain 1 217 317 - -
Pvu10g0728 610 PANTHER OS01G0588500 PROTEIN-RELATED 47 603 - -
Pvu10g0728 610 SUPERFAMILY Protein kinase-like (PK-like) 218 522 IPR011009 -
Pvu10g0728 610 ProSiteProfiles Protein kinase domain profile. 236 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0728 Pvu-Chr10 18178692 18182498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0728 211 515 Receptor kinase-like Gene Family AT4G02010 36.656 2.20e-51 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Pvu10g0728 PK_Tyr_Ser-Thr 1.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0728 - - aprc:113849641 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0844 8 7993682 7998848 Pvu10g0728 10 18178692 18182498 PCT