Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0710 ATGAGTTGCAGAGAAAGGAACAAAGGGGAAAGAGAAGACAAGGAATATAAGAACAGTTCAGTTGGATTGGAATCAAAATCAGTGAGACAAAGCATTGGCTCTATAGAAGATGAACAGCTAACAATTGATGAAAGTCTTCTGATTGACCCCAAGCTATTGTTTATTGGGTCAAAAATTGGCGAGGGAGCCCATGGGAGAGTTTATGAAGGAAGGTACAGAGAACGGATTGTTGCTATTAAAGTTCTGCATCGTGGGAGTACTTTGGAAGAAAGAGTTTCACTGGAGAATCGTTTTGCTCGGGAAGTTAATATGATGTCTCGTGTCCACCATGAGAATCTTGTGAAGTTTATTGGAGCTTGTAAGGATCCTCTGATGGTGATTGTTACAGAGATGTTACCTGGGTTGTCACTGCGAAGATATCTGATCACCATACGCCCTAAACCATTGGATCTTTATGTGGCTATAAAGTTTGCCCTTGATATTGCTTTAGCCATGAATTGGTTACATGCCAATGGCATCATACATAGAGATCTGAAGCCTGATAATCTACTGCTCACGGAAAACCAGGAGTCAGTTAAACTTGCTGATTTTGGTCTGGCAAGAGAAGAATCTGTGACTGAGATGATGACTGCGGAAACTGGAACTTACCGTTGGATGGCACCTGAGTTGTACAGTACAGTGACACTGCGTCAAGGGGAGAAAAAGCATTACAACAATAAGGTTGATGTCTACAGCTTTGGAATTGTTTTGTGGGAGCTACTAACAAATCGCATGCCTTTTGAAGGGATGTCCAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAGCCTTCCTGAAGACATATCTCCCGATCTTGCCTTTATCATACAATCATGTTGGGTTGAAGATCCTAACATGAGACCAAGCTTCAGTCAGATTATCCGCATGCTCAATGAGTTCATCCTCACTCTCCAACCGCCACCGCTTTCAGCACTGCCTGAACCTGACGACGAACCTGAGGCTGTGACAAGTAATGGCGCCATAACAGACTTTTCGACCCGAAATAAAGTAAAGTTTTCTTTTATTCGCCACCTTTTTTCTTCAAAGAGGACCAAAAGCTAA 1113 0.4268 MSCRERNKGEREDKEYKNSSVGLESKSVRQSIGSIEDEQLTIDESLLIDPKLLFIGSKIGEGAHGRVYEGRYRERIVAIKVLHRGSTLEERVSLENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTEMLPGLSLRRYLITIRPKPLDLYVAIKFALDIALAMNWLHANGIIHRDLKPDNLLLTENQESVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSLPEDISPDLAFIIQSCWVEDPNMRPSFSQIIRMLNEFILTLQPPPLSALPEPDDEPEAVTSNGAITDFSTRNKVKFSFIRHLFSSKRTKS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0710 370 Gene3D Phosphorylase Kinase; domain 1 41 132 - -
Pvu10g0710 370 MobiDBLite consensus disorder prediction 1 22 - -
Pvu10g0710 370 SMART serkin_6 53 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0710 370 Pfam Protein tyrosine and serine/threonine kinase 55 314 IPR001245 GO:0004672|GO:0006468
Pvu10g0710 370 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 16 344 - -
Pvu10g0710 370 MobiDBLite consensus disorder prediction 1 20 - -
Pvu10g0710 370 ProSiteProfiles Protein kinase domain profile. 53 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0710 370 SUPERFAMILY Protein kinase-like (PK-like) 48 331 IPR011009 -
Pvu10g0710 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Pvu10g0710 370 ProSitePatterns Protein kinases ATP-binding region signature. 59 80 IPR017441 GO:0005524
Pvu10g0710 370 PANTHER SERINE-THREONINE PROTEIN KINASE 16 344 - -
Pvu10g0710 370 Gene3D Transferase(Phosphotransferase) domain 1 137 323 - -
Pvu10g0710 370 CDD STKc_MAP3K-like 59 314 - -
Pvu10g0710 370 MobiDBLite consensus disorder prediction 325 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0710 Pvu-Chr10 17219157 17226224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0710 41 367 MAP Kinase Kinase Kinase AT5G01850 74.074 0.0 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pvu10g0710 PK_Tyr_Ser-Thr 7.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0710 - - gmx:100816708 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0851 8 8095439 8099756 Pvu10g0710 10 17219157 17226224 PCT