Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0706 ATGTACAAGGGTAGATTAGGAGGAAAAGCTCGTCTCGGATATGTTGAAACTGACCCTTCTGGTCGATATGGTCGTTTCAGGGACATTCTTGGCAAAGGAGCAGTGAAGGTAGTGTATAGGGCATTTGATGAAGTCCTTGGAATAGAGGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCATTCACCAGATCTTCTTCAACGCCTTTACTCAGAGGTTCATCTCCTCAAGACCTTGGAACATGACTCCATCATGACCTTCCATGATTCTTGGATTGATGTGAATTATAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTAAGAGAGTACAGAAAGAAGTATCAGAGAGTAGATATCAGAGCAGTGAAGAACTGGGCACGCCAGATTCTAAGTGGTTTGGAGTATTTGCATAGCCATGATCCTCCTGTTATACATAGAGACCTCAAGTGTGACAATATCTTCATCAATGGCCATCTGGGGCAGGTCAAGATTGGTGATTTGGGCCTTGCAGCCATTCTTCATGGCTCCCAACATGCACACAGTGTCATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATACAATGAGCTGGTTGACATATACTCCTTTGGGATGTGCATGATAGAAATATTTACTTCTGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTTCAGGGAAGCTGCCAGAAGCATTTTACAGAATCCATGACTTGGAAGCTCAGAGGTTTGTGGGAAAATGTTTGGTAGATGTCTCAGAGAGGTTGTCAGCAAAGGAGCTCTTGTTGGACTCATTTTTAGCCAAGGACCAACTAGACTCTCCACTCTCTAGCCCAACATTACCCAGAAAACAAACCCCCACACTCAATTTCACTGCATCAGTGGCCAAAGAGCTTCCACCAATGAGTGACCAAACAAAGGACACACACATGACCATCACTGGATCAATCAATGAAGAGGACGACACAATTTTCCTTAAAGTACAAATTTCTAACAAAAAGGGGGAAAAGAGGAATATATTCTTTCCATTTGACACCATAAACGACACTGCAATTGATGTGGCAGTGGAGATGGTTAAAGAACTCGAAATTAGTGACTTGGAACCATTGGAGATTGCTGAAATGATTGAGGAAGAGATATCAACTTTAGTCCCAACATGGAGGGATTGGGACACCTCTAATTATCAAAGACAACATAGTTTTACCTATGAAGAAGAGTATGATATGAGTAACCACCAACCTTACTTCTCCTCATCTTCTCGCTCTTCCTCTCATGGTTCTTTCCACAAGCATAATTCCCACCTCTGCGGGAACCATTACCCTTTTGCTCAAGATTGGCCTCAAGATGAGCTATCTACGAATGATGATGCGAGCTCTCAAAGCTCAATGAACTCCTTCAAGTGTTTCAATCTCAAGTACAGTGACCCTGGCAATGAAGATGGGCATGATCCAACTGTAGTACTAGGAGCAGAAGCCCTTGGCTACTCTCCAAAAGGCAACGAAAAGTACACCAGATTCTGTCCTCGAGAAGAAGTGATGGACGCTGATTCCACCAAACAGTTTTGCAACATGAGAATGGATTCTCACAGGTATCATGGAGTCCAGAGGCTAACCAGGATTAGTTCCTTTGTGGATCTAAGGAGACAACAACCGCAACGATCACTGATGGAAGAGATTCACAAGAGGAGAATCTTCAAGACGGTTGGTGCCATTGAGAACATTGGGTTTCAAAATCCAGAGGGAGCTGGGAGTTTTTTATTTTAA 1809 0.4328 MYKGRLGGKARLGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDLLQRLYSEVHLLKTLEHDSIMTFHDSWIDVNYRTFNFITELFTSGTLREYRKKYQRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILHGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEIFTSEFPYSECSNPAQIYKKVTSGKLPEAFYRIHDLEAQRFVGKCLVDVSERLSAKELLLDSFLAKDQLDSPLSSPTLPRKQTPTLNFTASVAKELPPMSDQTKDTHMTITGSINEEDDTIFLKVQISNKKGEKRNIFFPFDTINDTAIDVAVEMVKELEISDLEPLEIAEMIEEEISTLVPTWRDWDTSNYQRQHSFTYEEEYDMSNHQPYFSSSSRSSSHGSFHKHNSHLCGNHYPFAQDWPQDELSTNDDASSQSSMNSFKCFNLKYSDPGNEDGHDPTVVLGAEALGYSPKGNEKYTRFCPREEVMDADSTKQFCNMRMDSHRYHGVQRLTRISSFVDLRRQQPQRSLMEEIHKRRIFKTVGAIENIGFQNPEGAGSFLF* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0706 602 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Pvu10g0706 602 Pfam Protein kinase domain 28 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0706 602 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0706 602 CDD STKc_WNK 22 282 - -
Pvu10g0706 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pvu10g0706 602 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0706 602 PANTHER WNK KINASE 1 595 - -
Pvu10g0706 602 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 595 - -
Pvu10g0706 602 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Pvu10g0706 602 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0706 Pvu-Chr10 16852367 16857515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0706 14 594 MAP Kinase Kinase Kinase AT5G58350 53.061 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu10g0706 Pkinase 7.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0706 K08867 - gmx:100816187 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0854 8 8150584 8154387 Pvu10g0706 10 16852367 16857515 PCT