Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0705 ATGGGGAATCACAGGTTTAGATTATCAGATATGATTCCAAATGCTTGGTTTTACAAGCTGAGGGATATGGGAAAGGGAAGAAAGCTAAACACCACACTCTCTGGGAAGAAGAAGCAATCTTCATCCACTTCAACCACACATTCATCAAAACCAAACCAACCCCTCCACCAATACAACAACAACCCCAGAAAGTCCTACTACATCACAAGAGACCTCAAAACCTCACCCTCAAACACCCCAAAGTTTTCCCCTCCAAGAAAATCAACCAAACAAAGAACCAAAAGAAGAGCCCCAAGAACCACAAAACTTGTCTCCTCAGGCTGTAGCTGTCGCACCACCCTCGAATCCATGTGGACCAAATCAGATTCACCACAAGAACACTCTTCCTCATCCCCATTTGACTCCTCACCAGAGTCAGAGTCCCCAGAATTCAGAACAGACCGTGTTCTCCCGTGTTCTTCATCATTCGATGAAATGGTTTCCTATTCAACCACCTCTTGCGCCTCTTGCAGGCTTAACACAAACAAAAAGAACACCACCAACGACATCATCATCGACGTGGACAAAAACTCCATACCAAGAAAAGATAACAAGCTTGATGGCTACTACAATTACAACAACAACCACAACAACGACTATGATGACACCTTCTCAGAACTTGAGCTTCCTCCTTTCATAACCAAGCCACCAAAGTTGCTAAAGAAGAGAGAACTCAAACAAGGGTCGTTGAAGGTGAGAATTGTGAAGGAAGAGTCTGCAATGAAGGAACAGAGGAACAATGGTTCTGTGAGGCGGTTTTCTGTGAATTCTCCGGGGGTGAGATTGAGGGTCCACTCACCCAAAATCGCCGGCTGGAAGGGGCGGAAAAGTGTGTCGTCGACGGCGAGTTCTGGCTCCCGGAGAAGCCTCTCGGAGAGTTTTGCGGTTGTGAAGTCTTCTTTTGACCCACAGAAGGATTTCAGGGAGTCCATGGTGGAGATGATTGTGGAGAACAACATAAGGGCATCCAAGGACTTGGAGGATCTACTTGCTTGCTACCTTTCTCTCAATTCAGATCAGTATCACGACCTCATCATCAAAGTCTTCAAGCAAATTTGGTTTGACTTGACTCAACCAAGGTAA 1122 0.4572 MGNHRFRLSDMIPNAWFYKLRDMGKGRKLNTTLSGKKKQSSSTSTTHSSKPNQPLHQYNNNPRKSYYITRDLKTSPSNTPKFSPPRKSTKQRTKRRAPRTTKLVSSGCSCRTTLESMWTKSDSPQEHSSSSPFDSSPESESPEFRTDRVLPCSSSFDEMVSYSTTSCASCRLNTNKKNTTNDIIIDVDKNSIPRKDNKLDGYYNYNNNHNNDYDDTFSELELPPFITKPPKLLKKRELKQGSLKVRIVKEESAMKEQRNNGSVRRFSVNSPGVRLRVHSPKIAGWKGRKSVSSTASSGSRRSLSESFAVVKSSFDPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDQYHDLIIKVFKQIWFDLTQPR* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0705 373 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Pvu10g0705 373 Pfam Transcriptional repressor, ovate 313 369 IPR006458 -
Pvu10g0705 373 ProSiteProfiles OVATE domain profile. 309 368 IPR006458 -
Pvu10g0705 373 MobiDBLite consensus disorder prediction 28 146 - -
Pvu10g0705 373 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 371 - -
Pvu10g0705 373 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 307 370 IPR006458 -
Pvu10g0705 373 MobiDBLite consensus disorder prediction 33 86 - -
Pvu10g0705 373 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 371 IPR038933 GO:0045892
Pvu10g0705 373 MobiDBLite consensus disorder prediction 100 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0705 Pvu-Chr10 16779771 16781436 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu10g0705 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0705 - - gmx:100803805 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0865 8 8381572 8382699 Pvu10g0705 10 16779771 16781436 PCT