Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0703 ATGGAGCAAAAAGGAGGTGTGCTTATGCAGCGATATGAACTAGGGAGATTATTAGGCCAAGGAACTTTTGCAAAGGTTTATCATGCTAGGAACCTCATAACTGGCATGAGTGTGGCCATAAAAATTGTTGATAAAGAGAAGATTCTGAAAGTTGGGATGATTGACCAGATTAAGCGTGAAATTTCAGTGATGAGACTAATCAGGCATCCACATGTTGCTGAGCTTTATGAGGTAATGGCCAGCAAAACCAAAATTTACTTTGTCATGGAGTATGTAAAAGGCGGTGAGCTCTTTGACAAGGTATCCAAAGGAAAGCTCAAGCAGGATGATGCTAGGAAATATTTTCAGCAATTGATCAGTGCTGTTGACTACTGCCATAGCAGAGGTGTGTGCCATCGTGATCTGAAACCAGAAAATCTTTTACTGGATGAAGATGGGAATTTGAAGGTCTCAGATTTCGGTTTAAGTGCCCTTGCCGAAACTAAGCACCAGGATGGGTTACTCCATACCACATGTGGTACCCCTGCCTATGTTGCTCCAGAAGTGATAAACAGAAGGGGTTATGATGGAGCCAAAGCTGACATATGGTCATGTGGGGTGATCTTGTATGTTCTATTAGCTGGTTTTCTTCCATTTAGAGATCCAAATCTGATGGAGATGTACAGGAAGATTGGCAAGGGAGAATTTAAATTTCCGAACTGGTTTGCACCAGATGTGCGCAGACTGCTGTCTAAAATCTTGGATCCAAACCCAAAGACCAGGATATCAATGGCCAAAATTATGGAAAGTTCCTGGTTCAAAAAGGGGTTACAGAAGCCCACCATTACTCAGAATAAAGACGAAGAACTAGCTCCTCTGGATACTGATGGAGTATTTAGTTTTTGTCAGAATGGAGATCCTATTGAACCAGCAAAAGACTCTAAACCTTGTAATCTAAACGCTTTTGACATCATCTCCTATTCCTCAGGTTTTGACTTGTCTGGTTTGTTTGAGGAGACCACTGATCGTAAGAAAGAAGCACGATTTACCTCTGATAAGCCAGCATCTATTATCATCTCCAAGTTGGAAGAAATTTGCAAGCGCCTGCGGCTCAAACTCAAGAAGAAAGATGGAGGTTTGTTCAAGTTGGAAGGTTCCAAGGAAGGCAGAAAAGGGCCTTTGGGTATTGATGCTGAGATTTTTGAGATCACCCCAGTTTTCCATTTTGTGGAGTTAAAAAAGTCTAGCGGAGACACATTGGAGTACCAAAATCTTTTGAAACAGGAAGTAAGACCTGCACTTAAGGATATTGTTTGGAACTGGCAAGGAGAACAGCCACATCAACTGCAACATGGAGTGTTGCAGAAAGAGGAACAACCTTCTTATCCTGCCACATCAGAGATTTTGCCCCAACCAACTGCGTAG 1404 0.4217 MEQKGGVLMQRYELGRLLGQGTFAKVYHARNLITGMSVAIKIVDKEKILKVGMIDQIKREISVMRLIRHPHVAELYEVMASKTKIYFVMEYVKGGELFDKVSKGKLKQDDARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDEDGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVINRRGYDGAKADIWSCGVILYVLLAGFLPFRDPNLMEMYRKIGKGEFKFPNWFAPDVRRLLSKILDPNPKTRISMAKIMESSWFKKGLQKPTITQNKDEELAPLDTDGVFSFCQNGDPIEPAKDSKPCNLNAFDIISYSSGFDLSGLFEETTDRKKEARFTSDKPASIIISKLEEICKRLRLKLKKKDGGLFKLEGSKEGRKGPLGIDAEIFEITPVFHFVELKKSSGDTLEYQNLLKQEVRPALKDIVWNWQGEQPHQLQHGVLQKEEQPSYPATSEILPQPTA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0703 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pvu10g0703 467 Gene3D Kinase associated domain 1, KA1 309 433 - -
Pvu10g0703 467 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0703 467 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0703 467 SUPERFAMILY Protein kinase-like (PK-like) 8 279 IPR011009 -
Pvu10g0703 467 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Pvu10g0703 467 CDD CIPK_C 313 428 - -
Pvu10g0703 467 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pvu10g0703 467 Gene3D Transferase(Phosphotransferase) domain 1 3 308 - -
Pvu10g0703 467 PANTHER - 2 445 - -
Pvu10g0703 467 CDD STKc_SnRK3 11 265 - -
Pvu10g0703 467 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0703 467 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 445 - -
Pvu10g0703 467 Pfam NAF domain 309 368 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0703 Pvu-Chr10 16599946 16603627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0703 1 438 CBL-interacting serine-threonine protein kinases AT5G58380 65.784 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu10g0703 Pkinase 5.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0703 K07198 - gmx:100815651 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0866 8 8428340 8430722 Pvu10g0703 10 16599946 16603627 PCT