Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0673 ATGCCACATTCTCTGTTTCTCTTTGACTTTCTGCTTCTCATATTCCAAGTTTTGTTCAGTTTCATTCCCGCGCTTTCTCTCTCCTCTGACGGCCTCGCGCTTCTCGCTCTAAAGTCCGCCGTCGACCAGCCCTCCTCCGCCTTCTCCGACTGGAACGACGGCGACGTCACGCCCTGCGCCTGGTCAGGAATCGTTTGTGCCAATATCTCCGGCGAGGAGGATCCCCGCGTGGTAGGAATCTCCCTCGCCGGAAAATTCATCTCCGGCTACCTTCCATCGGAGCTCGGCACGCTGCGGTTCCTCCGCCGACTCAACCTCCACGACAATGCCTTCTCCGGCGTCCTCCCGGCGCAGCTCGGCAACGCCACCGCACTCCACAGCCTGTTCCTCCACCGCAACAACCTCTCCGGCCCCATACCCCGGTCCCTCTGTACCCTACCGCGCCTCCAAAATCTCGACCTCTCCGAAAACGCATTCTCCGGCCACATCCCCGACCACCTCGGAAACTGCAAGAACCTCCAGCGCCTCATCGTCGCCGGCAACAGATTCTCGGGCGAGATTCCCGCCGGTGTGTGGCCGGAACTTCAGAACCTCCTCCAACTCGACCTCTCCGCGAACGAGTTAACCGGTTCAATCCCTGACGAAATCGGAACCCTAGTTTCCCTCTCTGGCACGCTCAACCTCTCCTTCAACCATCTCTCCGGTAAGATTCCGGCGTCGCTGGGAAAATTACCGGCGACGGTGAGCTTCGATTTCAAAAGCAACAATCTCAGCGGCGAAATTCCCCAAACGGGGTCGTTTTCAAACCAAGGTCCCACGGCGTTCCTTGGAAATCCTAACCTATGTGGGTTTCCTCTTAGAAAATCATGTTCCGGTTCCGACCGGGATTTTTCTCCTGGTTCGGATCAAAACAAACCGGTTAACCGGCCAAAGGGGTTGAGCCCCGGTTTAATTATTTTGATCTCCGCGGCTGATGCTGCTGTTGTGGCCTTCATTGGGCTTGTGATTGTTTATGTCTATTGGAAGAACAAAGATAATGAGAATGGTTGTAGTTGCATTAGGAGAAGAAAGTTTGGCGAAGAGAAAGGGAGTGTGTGTGTGTGTGGTGGATTCCCATGTGTTACTGGGGACAAAAGTGATGATGATGAAGATTATGAGGTGGAGGGGGCTGAGGGAGAGGGTGAGGGGGAAGGGGAATTGGTGAGGATTGATAAGGGATTGAGTTTTGAACTTGATGAGTTGTTGAGGGCCTCTGCTTATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTATAAGGTGGTGTTGGGGAATGGGGTGCCTGTGGCTGTAAGGAGGCTGGGGGAGGGAGGGGAACAGAGGTATAAGGAGTTTGCTGCAGAGGTTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTAAGGTTGAGGGCTTACTATTGGGCACATGATGAGAAACTTCTCATCAGTGATTTCATCTCCAATGGCAATCTGACACATGCCCTTAGAGGGAGAAATGGGCAACCATCTACAAATCTTTCATGGTCCACCAGGCTGAAAATCGCAAAAGGAACAGCGAGGGGCTTGGCGTATCTCCACGAATGCAGTCCAAGAAAGTTCGTCCATGCTGACATCAAACCCTCCAACATCCTACTTGACAACAACTTCCAACCCTACATTTCCGACTTCGGCCTAAACCGTCTGATCAGCATCACCGGCAACAACCCCTCCACCGGTGGATTCATGGGTGGAGCTCTTCCTTACATGAAGTCTTCACAGAAAGAGAGAACCAACAATTACAAAGCCCCTGAGGCTGGTGTCCCTGGCTGCAGGCCCACCCAGAAATGGGACGTGTACTCATTTGGAGTTGTGTTGCTTGAAATACTAACTGGGAGGTCACCAGAATCATCTCCTACCACATCAACTTCCATGGAAGTCCCTGACTTGGTAAGGTGGGTGAGGAAAGGGTTCGATCAAGAAAGCCCGTTATCTGAGATGGTTGATCCATCGCTGCTCCAAGAAGTGCGTGTTAAGAAAGAGGTGCTGGCGGTGTTTCATGTAGCTTTGGCTTGCACTGAAGGAGACCCTGAGGTTCGGCCAAGGATGAAAACTGTCTCTGAAAATCTTGATAAGATTGGAAGTTAA 2142 0.5238 MPHSLFLFDFLLLIFQVLFSFIPALSLSSDGLALLALKSAVDQPSSAFSDWNDGDVTPCAWSGIVCANISGEEDPRVVGISLAGKFISGYLPSELGTLRFLRRLNLHDNAFSGVLPAQLGNATALHSLFLHRNNLSGPIPRSLCTLPRLQNLDLSENAFSGHIPDHLGNCKNLQRLIVAGNRFSGEIPAGVWPELQNLLQLDLSANELTGSIPDEIGTLVSLSGTLNLSFNHLSGKIPASLGKLPATVSFDFKSNNLSGEIPQTGSFSNQGPTAFLGNPNLCGFPLRKSCSGSDRDFSPGSDQNKPVNRPKGLSPGLIILISAADAAVVAFIGLVIVYVYWKNKDNENGCSCIRRRKFGEEKGSVCVCGGFPCVTGDKSDDDEDYEVEGAEGEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVMAIGKVKHPNVVRLRAYYWAHDEKLLISDFISNGNLTHALRGRNGQPSTNLSWSTRLKIAKGTARGLAYLHECSPRKFVHADIKPSNILLDNNFQPYISDFGLNRLISITGNNPSTGGFMGGALPYMKSSQKERTNNYKAPEAGVPGCRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVRWVRKGFDQESPLSEMVDPSLLQEVRVKKEVLAVFHVALACTEGDPEVRPRMKTVSENLDKIGS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0673 713 CDD STKc_IRAK 422 711 - -
Pvu10g0673 713 Pfam Protein kinase domain 421 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0673 713 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 11 712 - -
Pvu10g0673 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 712 - -
Pvu10g0673 713 Gene3D Transferase(Phosphotransferase) domain 1 492 713 - -
Pvu10g0673 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Pvu10g0673 713 SMART LRR_typ_2 98 121 IPR003591 -
Pvu10g0673 713 SMART LRR_typ_2 146 170 IPR003591 -
Pvu10g0673 713 SMART LRR_typ_2 195 219 IPR003591 -
Pvu10g0673 713 Gene3D Ribonuclease Inhibitor 27 191 IPR032675 -
Pvu10g0673 713 SUPERFAMILY L domain-like 28 287 - -
Pvu10g0673 713 SMART serkin_6 420 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0673 713 SUPERFAMILY Protein kinase-like (PK-like) 421 707 IPR011009 -
Pvu10g0673 713 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Pvu10g0673 713 Gene3D Ribonuclease Inhibitor 192 292 IPR032675 -
Pvu10g0673 713 Pfam Leucine rich repeat 101 158 IPR001611 GO:0005515
Pvu10g0673 713 Gene3D Phosphorylase Kinase; domain 1 408 491 - -
Pvu10g0673 713 ProSiteProfiles Protein kinase domain profile. 416 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0673 Pvu-Chr10 12338162 12343017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0673 23 711 Receptor kinase-like Gene Family AT1G67510 68.451 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu10g0673 Pkinase 3.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0673 - - var:108346287 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0948 8 9523342 9523827 Pvu10g0673 10 12338162 12343017 PCT