Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0672 ATGGAATATTCTTCTTCAGCAGCTTCTGAAATAAAATATGTTGTTTTTCTTTCTCTCTTGATTATTTCAATTTTGAAAGGTGTAGAATCAAAGCAACTGTCAGATAATGTTCCTCAAATAAAGTATGATGTGTTTGTTAACTTCAGGGGCGAGGACATTCGTCACAGTTTTCTCGGTTATCTGACTGAGGCTTTTCATCAACACAAAATATATGCCTTTGTTGATGATAAACTTGGGAAGGGAGATGAAATATGGCCATCCCTTGTTGGAGCAATTAAAGGATCCCTGATTTCCTTGACCATATTCTCAGAAAACTATGCTTCTTCTCGTTGGTGTTTGGAGGAACTTGTGCAAATACTTGAGTTCAGGGAGAAATATGGACAAATTGTATTACCTGTTTTCTACCATGTATATCCCAAAGATGTGCGACATCAAAAGAGGAGCTATGAAAAAGCTCTTGCTGAACATGAAAAGAAATATAATTTCACCACAGTGCAAAACTGGAGACATGCATTGAAGAAAGCTGCTAATTTATCAGGAATAAAGTCTTTCGATTACATGACTGAAGTTGAGTTGCTTGGAGAAGTTATCAATATTATTAATCTTGTGCTGAGGAGGTTGGGCGAGCATCCACTTAACTTAAAAGGAGTTGTGGGAATTGAAAAACAAGTTCAATATTTAGAATCATTATTGCTTCAGGAGTCAACAGATGTCCGTGTTATTGGAATTTGGGGTATGGGTGGTATCGGAAAGACAACAATAGCAGAAGAAATATTTAACAAACTATACTCCAAATATGATGGTCACTGTTTTTTGGCCAATGTAAAGGAAGAAACAAGAGGACATGGGACAATTTCTTTGAAGGAAAAAATGTTTTCTATGCTACTAGCAGAAAATGTGAAAGTGAACACAGCAAATGGATTGTCAAATTATATTAAGAGAAAGATTGGTCGTATGAAGGTTTTAATTGTTTTGGATGATGTGAATGATTCTGATCTACTGGAAAAATTATTTGGAAATCATGGCTGGTTGAGACAAGGTAGTAGAATAATTATAACAACTAGAGACAAGCAAGTGCTTATCGCTAATAAAGTTGATGATATATACCAAGTAGGGGCATTGAAATCAAGTGAGGCAATAGAGCTTTTCAGCTTGTATGCCTTTAACCAAAATAATTTTGATATGGAGTATTACAAGCTATCAAAGAGGGTGGTCAATTATGCAAAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCATCTTCTTTGTGGAAAAGATAAGGAAGTATGGGAAAGTCAGCTAGACAAACTCAAAAACATGCCAAATACAGATGTTCACAATGCAATGAAACTGAGTTATGATGATCTAGATCGCAAAGAGCAGAAGATTTTTTTAAATCTAGCATGCTTCTTCGTGCAATTGAATTTGAAAGTGGACCGCATAAAAGATTTATTGAAAGATGGAGAAAGAGATAATTCAGTAATAGTTGGGATAGAAAGGTTGAAAGATAAAGCTCTTATAACCATTTCTGAAGACAATGTTATATCTATGCATGATATTATACAAGAAATGGCTTGGGAGATTGTTCGTCATGAATCTATTGAAGACCCTGGAAGTCGTAGTCGATTGAGGGATGTGGATGACATTCATGAAGTATTACAAAATAATAAGATGAGCAAACTACAATTTTTGTATTTTCCAAGTGAAGATGTCTTTGATCTTCTTCCTCAAGGGCTACATTCTTTGCCAGTTGAGTTAAGATATCTTGCATGGACGCATTACCCTCTGAAATCGTTGCCAGAGAATTTTTCTGCTGAAAAGCTTGTTATATTGGACTTGTCAGATAGCCAAGTGGAAAACCTTTGGGATGGAGTGCAGAATTTGATGAATTTAAAAGAAGTCAAACTCTCTGGTTCTAAAAGCTTGAAGGAGCTGCCAGACCTTTCAAAAGCCACAAATCTTGAAGAACTGTATATCAATTCTTGTCCTCAGTTGACCAGTGTGAGCCCCTCTATTTTCTCCCTCAAGAAGCTCGAGAAGTTGGATCTTGGTTTCTGTTCCCTTACCAAGATTATAAGCAGGAACCATTTAAGCTCCCTTAGTTATTTCAACCTTATATTCTGCAACAAACTAAGGGAATTTTCAGTGACATCAGAGAATTTGGTTATGCTAGATTTGTCATTCACTCCTGTTAATGCATTGCCTTCATCTTTTGGACGTCAAAGCAAGCTTGAAATCCTATTGCTAATAAACAGTGGCATCCAGAACTTGCCTTCAGACTTCAAGAATCTTACAAGACTTCGATATCTGAATGCTTATAATTCCACAGAGCTTCATACTCTAACGGAGCTTCCACCTTCTCTTCAAACTCTAGATATCACAGGATGCACATTATTGAAGACCGTGTGGCTTCCATCAATTTCTGAACAATTGAAGGAAAGCCGGAGAGAAGTTCTCTTTTGGAATTGCTTGAAATTGAACAGACACTCTCTTAAGGCTATTGGGTTAAATGCACATATTAACGTGATGAAATTTGCGTACCATCACTTATCTGCACCAGATGAAAATTATGATGATTATGATCGTAATTATAGATCATATCAAGTAAGGTTTGTGTATCCAGGAAGCAGAATTCCAGAGTGGCTGGAATATAAGACAACAAAGGATTATGTTGTCATTGATCTCTCTTCTACTCCACGCTCCTCTCCAATAGGCTTTATTTTCTGCTTTGTTATTTCTGGCCCTAAGGTGAGGACAATGAAAGGTTATGGCTTCATATTTTATATCACTATCACTAAAGATGAGGATGAAAGTAAAAAAGATTCTATCTACATCTACATGTATAGCCCTGTTATGAGGGTTGCATCAGATCATGTGTGTGTGATTTATGACCAACGATGTTCTCACTACCTGAACAACAGAGCCAAAACCCTGACAAAACTTAAAATCAAGGTTAAAGCAATTGCAGGAAACATGCACCATCAACAGGCAACTGATAAAGGCAAAAACAGAGTCTTGGGCTCCTTCTTAAAGGCACCGAAGATCAATACAAGGAGGAAACCCTATTGGATTTTCGAACATAAGATAGAGAGAAAACAGGGAAGGGATAGCTAG 3114 0.3671 MEYSSSAASEIKYVVFLSLLIISILKGVESKQLSDNVPQIKYDVFVNFRGEDIRHSFLGYLTEAFHQHKIYAFVDDKLGKGDEIWPSLVGAIKGSLISLTIFSENYASSRWCLEELVQILEFREKYGQIVLPVFYHVYPKDVRHQKRSYEKALAEHEKKYNFTTVQNWRHALKKAANLSGIKSFDYMTEVELLGEVINIINLVLRRLGEHPLNLKGVVGIEKQVQYLESLLLQESTDVRVIGIWGMGGIGKTTIAEEIFNKLYSKYDGHCFLANVKEETRGHGTISLKEKMFSMLLAENVKVNTANGLSNYIKRKIGRMKVLIVLDDVNDSDLLEKLFGNHGWLRQGSRIIITTRDKQVLIANKVDDIYQVGALKSSEAIELFSLYAFNQNNFDMEYYKLSKRVVNYAKGIPLVLKVLGHLLCGKDKEVWESQLDKLKNMPNTDVHNAMKLSYDDLDRKEQKIFLNLACFFVQLNLKVDRIKDLLKDGERDNSVIVGIERLKDKALITISEDNVISMHDIIQEMAWEIVRHESIEDPGSRSRLRDVDDIHEVLQNNKMSKLQFLYFPSEDVFDLLPQGLHSLPVELRYLAWTHYPLKSLPENFSAEKLVILDLSDSQVENLWDGVQNLMNLKEVKLSGSKSLKELPDLSKATNLEELYINSCPQLTSVSPSIFSLKKLEKLDLGFCSLTKIISRNHLSSLSYFNLIFCNKLREFSVTSENLVMLDLSFTPVNALPSSFGRQSKLEILLLINSGIQNLPSDFKNLTRLRYLNAYNSTELHTLTELPPSLQTLDITGCTLLKTVWLPSISEQLKESRREVLFWNCLKLNRHSLKAIGLNAHINVMKFAYHHLSAPDENYDDYDRNYRSYQVRFVYPGSRIPEWLEYKTTKDYVVIDLSSTPRSSPIGFIFCFVISGPKVRTMKGYGFIFYITITKDEDESKKDSIYIYMYSPVMRVASDHVCVIYDQRCSHYLNNRAKTLTKLKIKVKAIAGNMHHQQATDKGKNRVLGSFLKAPKINTRRKPYWIFEHKIERKQGRDS* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0672 1037 SUPERFAMILY L domain-like 517 806 - -
Pvu10g0672 1037 Gene3D Ribonuclease Inhibitor 541 693 IPR032675 -
Pvu10g0672 1037 Pfam TIR domain 41 184 IPR000157 GO:0007165
Pvu10g0672 1037 SUPERFAMILY Toll/Interleukin receptor TIR domain 38 180 IPR035897 -
Pvu10g0672 1037 Pfam NB-ARC domain 222 455 IPR002182 GO:0043531
Pvu10g0672 1037 Gene3D - 39 206 IPR035897 -
Pvu10g0672 1037 SMART till_3 41 178 IPR000157 GO:0007165
Pvu10g0672 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 467 IPR027417 -
Pvu10g0672 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 858 IPR044974 GO:0006952
Pvu10g0672 1037 ProSiteProfiles TIR domain profile. 40 204 IPR000157 GO:0007165
Pvu10g0672 1037 Gene3D - 373 457 IPR042197 -
Pvu10g0672 1037 PRINTS Disease resistance protein signature 240 255 - -
Pvu10g0672 1037 PRINTS Disease resistance protein signature 315 329 - -
Pvu10g0672 1037 PRINTS Disease resistance protein signature 408 422 - -
Pvu10g0672 1037 PRINTS Disease resistance protein signature 673 689 - -
Pvu10g0672 1037 Gene3D - 207 368 IPR027417 -
Pvu10g0672 1037 Gene3D Ribonuclease Inhibitor 694 829 IPR032675 -
Pvu10g0672 1037 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 39 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0672 Pvu-Chr10 12250035 12255104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0672 42 771 WRKY Transcription Factor Family AT4G12020 32.988 1.67e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0672 - - gmx:100796110 1382.47