Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0656 ATGGGAGGGTGTTGCAGTTGCTCTGGTTCATTTGTAGACAAGGTATATGATTTGGAATGTTCATGTAAGCATTACATTGATTATGGTGCATGTAAACATGGTGGGGCAGGGGTCATGTTAAGAGGGTCCTCTGAGTTTGTATCCATGTTCAGCCAAAAGGGTTCAAAAGAAGTTAATCAAGATGCATTGACTGTTTGGAAGGACTTCACTGGAAAAAAGGACACGATCTTTTGTGGCGTGTTTGACGGTCATGGTCCTCTAGGACACAAGTTTGCACGGTCTTTACGTGAAAAACTACCCTCAAAACTCTCAGCATCAATTAAACAGTCACAACAAAAGGTTGTCAAACATACTAATGATACAGATGGAAGTAGTCATAGTAATGTCTATGTTGAGGATGACCAAAACATGTCCTTTTCTTCATGGGAGGGAAGCTTTACGAGGTGCTTCAATGAAATGGATGAAGAGCTTATTAAGAACATAGACTCTAAAGGATTTGGTGGCGGTAGCACTGCTGTAACTGTTATCAAACAGGGTGACCAATTAATAATTGGCAATTTGGGGGATTCTCGTGCAGTTCTTTGCAGAAGAGCACATGACAACCATCTTGTTCCTGTTCAACTTACTGTTGACTTGACCCCAAATATTCCAAGTGAAGCTTTAAGAATCATCAATTGCGGAGGTAGTATTTTTTCTTTAAAAGAACAACCAAGTGTAAAGAGAATATGGAGGCCACAAGGGGCTCGCCCTGGACTCGCTATGGCAAGAGCCTTCGGAAACTTTTGCCTAAAAGATTACGGTCTCATCGCAGTTCCCGATGTATCATACAGAAAACTCACCGAGCAGGATGAGTTTGTGGTTTTGGCTTCTGATGGGGTATGGGATGTGCTAACAAACAGTGAAGTGATAAACATAGTTGCTTCAGCACCAAAAAGGTCCATGGCAGCTAATTTGTTAGTGAACCATGCAATTAAAGCTTGGAGACGTAAATATGGTTCCAAGGTTGATGATTGTACAGCTATATGCTTGTTCTTGAAGGATCAGACTGTTTGGACCCAATCCTGA 1065 0.416 MGGCCSCSGSFVDKVYDLECSCKHYIDYGACKHGGAGVMLRGSSEFVSMFSQKGSKEVNQDALTVWKDFTGKKDTIFCGVFDGHGPLGHKFARSLREKLPSKLSASIKQSQQKVVKHTNDTDGSSHSNVYVEDDQNMSFSSWEGSFTRCFNEMDEELIKNIDSKGFGGGSTAVTVIKQGDQLIIGNLGDSRAVLCRRAHDNHLVPVQLTVDLTPNIPSEALRIINCGGSIFSLKEQPSVKRIWRPQGARPGLAMARAFGNFCLKDYGLIAVPDVSYRKLTEQDEFVVLASDGVWDVLTNSEVINIVASAPKRSMAANLLVNHAIKAWRRKYGSKVDDCTAICLFLKDQTVWTQS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0656 354 PANTHER ALPHABET, ISOFORM E-RELATED 1 353 - -
Pvu10g0656 354 SUPERFAMILY PP2C-like 46 347 IPR036457 -
Pvu10g0656 354 ProSiteProfiles PPM-type phosphatase domain profile. 46 345 IPR001932 -
Pvu10g0656 354 SMART PP2C_4 36 343 IPR001932 -
Pvu10g0656 354 CDD PP2Cc 46 345 IPR001932 -
Pvu10g0656 354 Gene3D - 42 348 IPR036457 -
Pvu10g0656 354 SMART PP2C_SIG_2 50 345 IPR001932 -
Pvu10g0656 354 ProSiteProfiles Zinc finger SWIM-type profile. 11 42 IPR007527 GO:0008270
Pvu10g0656 354 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 353 - -
Pvu10g0656 354 Pfam Protein phosphatase 2C 67 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0656 Pvu-Chr10 11413759 11415954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0656 42 347 PP2C-type Phosphatase Gene Family AT1G16220 47.040 6.72e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0656 - - vra:106755106 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0930 8 9293143 9296477 Pvu10g0656 10 11413759 11415954 PCT