Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0649 ATGTCTTTCAGTTTCACTGACCTCCTTTCCAACAGCAATAGCTTGACCATGGATGATGATCCTTTTGGACTTGAATTTGCCAACACATTCAAACAATTTCAACCTCTTTCACTGCCTCTCCCTTCTTATTCAGAGTTCCCACCTGGTTTTTCCCCAACAACACAGTCATTGAACTCACCCCTCTTCTTCTCTTCTCAAAATGTTCCTGCATCTTACACAGCTGAGTCATCTTCCAGCATGAGCTTCAACATGAGAAACAGTTCAACTGGGGATCAGATAGGAAACAAGGAGGAAGAGAGATACTGCTCTGACTTCTCTTTCCTAACAAAAACAAACCACGTGCCTCTCTTTCAATCTTCCACAAGCATGTTTGAAGTGGAGCCAGTAAAGAAACAGGACACAATGATGTTGAATGAAGCTGCAAAGCAAACAGATTTCTCATCTGAGAGGACACAAACAAAATCTGAATATGTAATCACTCAGGGCTTCTCCACAGAAGTTGCCTCAATCAAACCTGAAATACAAAGCAATTCTACTTCTGTGTCTGTTCAATTTAACTCTAATAATGCTTTTAAGTGTATTAGAGAACAAAGGAAATCAGAAGATGGGTACAATTGGAGGAAGTATGGAGAGAAACAAGTGAAAGGAAGTGAGCATCCGCGCAGTTATTACAAGTGCACGTATCCAAATTGTCCAACAAAGAAGAAAGTAGAGAGGTCTTTGGAGGGACATGTTACTGAAATAGTATACAGGGGAAGTCACAATCATCCTAAGCCACATAACAAAAAAAATGGCTCTCAATCAATTCATCAAACTTCTTCATCCTGCACCATCTCAGGGATTTCAGATCAGTCTATGGGAGAGGAAGGTTTTGAGCAAACATCACAAACTAGTTGCTCTGGAGGGGTTGATGATGAGGACCTTGGACCTGAGGCCAAAAGATGGAAAGGAGAGAATGAAAATGATGACTATTCTAATTCATCAGCTGGGAGTAGAACTGTTAAGGAACCTAGAGTTGTGGTTCAAACCACAAGTGAAATTGACATACTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTGGTCAAAGGAAACCCAAACCCAAGGAGTTACTACAAATGCGTTAGCTCAGGTTGTCCAGTTAGAAAACATGTTGAGAGAGCTGCAAATGATATGAAAGCTGTGCTAACAACCTACGAAGGGAAACATAACCATGATGTGCCTTTAGGACGAGGAAGTGCAAGCTATAACAGAACTTCTCTAAACAACACCACCAGCAATGTAACAGTACCTGCCCCTATAAGGCCTTCAGCAGTGAATAATTATTCTAACTCAGCAAGTTTCACCAATTCACTCCCTGATACCAAGCTATCAGCATCTGCAAGTCTAGACACTATTCCAATGGACATGTTGATGAACCCTGGAAGCCTAGGATTTTCGGCTAATGACTCATTCCTTCAGTCTTTTTTTTCAAAGAACTTCTAA 1491 0.4091 MSFSFTDLLSNSNSLTMDDDPFGLEFANTFKQFQPLSLPLPSYSEFPPGFSPTTQSLNSPLFFSSQNVPASYTAESSSSMSFNMRNSSTGDQIGNKEEERYCSDFSFLTKTNHVPLFQSSTSMFEVEPVKKQDTMMLNEAAKQTDFSSERTQTKSEYVITQGFSTEVASIKPEIQSNSTSVSVQFNSNNAFKCIREQRKSEDGYNWRKYGEKQVKGSEHPRSYYKCTYPNCPTKKKVERSLEGHVTEIVYRGSHNHPKPHNKKNGSQSIHQTSSSCTISGISDQSMGEEGFEQTSQTSCSGGVDDEDLGPEAKRWKGENENDDYSNSSAGSRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVSSGCPVRKHVERAANDMKAVLTTYEGKHNHDVPLGRGSASYNRTSLNNTTSNVTVPAPIRPSAVNNYSNSASFTNSLPDTKLSASASLDTIPMDMLMNPGSLGFSANDSFLQSFFSKNF* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0649 496 ProSiteProfiles WRKY domain profile. 201 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 MobiDBLite consensus disorder prediction 250 337 - -
Pvu10g0649 496 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 493 IPR044810 GO:0003700
Pvu10g0649 496 SUPERFAMILY WRKY DNA-binding domain 342 410 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 Pfam WRKY DNA -binding domain 201 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 Pfam WRKY DNA -binding domain 351 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 Gene3D WRKY domain 335 411 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 Gene3D WRKY domain 185 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 SUPERFAMILY WRKY DNA-binding domain 196 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 MobiDBLite consensus disorder prediction 306 321 - -
Pvu10g0649 496 ProSiteProfiles WRKY domain profile. 345 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 MobiDBLite consensus disorder prediction 264 302 - -
Pvu10g0649 496 MobiDBLite consensus disorder prediction 322 337 - -
Pvu10g0649 496 SMART WRKY_cls 350 409 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 SMART WRKY_cls 200 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g0649 496 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 12 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0649 Pvu-Chr10 11258171 11261871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0649 195 446 WRKY Transcription Factor Family AT2G38470 58.246 6.55e-106 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu10g0649 WRKY 6.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0649 K13424 - gmx:100127367 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0920 8 9198199 9201344 Pvu10g0649 10 11258171 11261871 PCT