Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0632 ATGGCTCCAAAAGCTATGTTTCGCCTTCTCATCTTTCTCACTCTCCTAGTTTCTTCCACTGCTTTTTCCTTCATATTCCATGGCTTCAATGAAAGCAATATCACCCTTGAAGCGAATGCACAGGTTGACAACCAAGGTAGACTCGAGCTTACCAGAAGAGAAACCAACATTGTTGGCCATGCATTCTATAACAAATCCATTAATATACATAACAAAAATGCTTCATCCCTCCAGCCAAAGGTTTTTTCCTTTAGTACATGCTTTGTTTTCTCAATTGTGTCACCAAGCTCTGGCCCTGGTGGTTTTGGTCTTGCCTTCACCATAGCTCCTTCAACACAATTCCCAGAAGCTGATGGTGGCCATCTTCTTGGTCTTTTCAACTCTGATAATGATATGAACTCCTCAAATCATATCTTTGTGGTTGAGTTTGATACAGTGAATGGCTACAAAGATGCCACTGACACTGTAGGAAACCATGTGGGGGTGAACAAAAATGGCATGTCCTCAAATATATCTGAGCCTGCCGCTTACTATAAAGATGGCAAAAAGGAAGAGTTCAACATGGAGAAGGCTGACGCTGTTTGTGCTTGGATTGAATATGATGGTGAAACAGAAATACTGAATCTCACAATAGCCTCTTATTTGGAACCAAAACCAAGCAAACCACTTATATCCGAGGCTGTTGACATCAAGTCTGTCATGAAGGAAAGCATGTTTTTTGGTTTCTCTGCGTCAACAGGTGAGAGCAAAGCAAGTGCCCATTATATTCTGGGGTGGAGCTTTGCATTGAATGGGGTTGCCCCTCCACTAGATGCTTCACTACTTCCAAAGCCACCCCCAAAGGAGAAAGACTCACACTCTTTTCCTTGGATAAAGGTTATAATTGGCATCTTGGCTGCTTTGACATTTACCTTGTTGTGCCTTTTGTTTTTTGTAACACTCCATAAGAGATATATGGAATTTGAAACTCTTGAGGACTGGGAGATGGATTGTCCTCATAGGTTCAGATATAAAGATCTTCACCTAGCAACAAAGGGGTTCATAGAGAGCCAAAAAATTGGAGTTGGAGGCTTTGGTTCTGTGTACAAAGGGGTGTTACCCAGCACAAGAACTGAGGTTGCTGTTAAAAGGATCCTGAGAAGTCCAGCCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTGAGGCACAAGAACTTGGTGAACCTTCAAGGGTGGTGCAAGCACAAGAATGATCTCCTCCTAGTTTATGATTACATTCAGAATGGGAGCCTTGACTCTCTCCTATTCAACAAAAACTTTGTTTTGGATTGGGACCAGAGATTCAAAATTCTCAAAGGTGTAGTTGCTGGGCTGTTGTATCTTCATGAAGAATGGGAGCAAGTGGTGATCCATAGGGATGTGAAATCTAGCAATATTCTTATTGACGTAGACTTCAATGCTCGTTTGGGTGACTTTGGACTAGCAAGACTTTGTAGCCATGATCAAGTGTCACACACAACAAGTGTGGTTGGAACCATTGGATATATTGCACCAGAGTTAACTAGGACAGGAAAAGCATCTACAAGCTCTGATGTGTACGCATTTGGGGTCCTACTTCTTGAAGTGGTTGCTGGAACAAGGCCTGTTGGTTCATCAGGTCAGTTTTTCTTGGTGGATTGGGTTCTTGAAAATTGTCAACTGGGTCAGATTCTTGAAGTGGTTGATCCAAAGCTAGATTCTGTTTATGATGAAGAGGAAGTAGAGTTGGTTCTGAAATTGGGTCTACTATGCACTCAAAACAAAGCTGAGTATAGACCCTCTATCGAACAAGTTACTAGGTACCTAAACTTTGATGACCCTTTTCCTGATATCTCTGATTGGAGATACTATGATTCTCAAAGTAGCACAACAAGCTTAGGTTTTACAGAAGCCATGTCTTCATCCTCGTACAGTTTAGCCTCCATTGAAAGGAATCCAATGTCCAGTGGCAGATAG 1989 0.4198 MAPKAMFRLLIFLTLLVSSTAFSFIFHGFNESNITLEANAQVDNQGRLELTRRETNIVGHAFYNKSINIHNKNASSLQPKVFSFSTCFVFSIVSPSSGPGGFGLAFTIAPSTQFPEADGGHLLGLFNSDNDMNSSNHIFVVEFDTVNGYKDATDTVGNHVGVNKNGMSSNISEPAAYYKDGKKEEFNMEKADAVCAWIEYDGETEILNLTIASYLEPKPSKPLISEAVDIKSVMKESMFFGFSASTGESKASAHYILGWSFALNGVAPPLDASLLPKPPPKEKDSHSFPWIKVIIGILAALTFTLLCLLFFVTLHKRYMEFETLEDWEMDCPHRFRYKDLHLATKGFIESQKIGVGGFGSVYKGVLPSTRTEVAVKRILRSPAQGMREFAAEIESLGRLRHKNLVNLQGWCKHKNDLLLVYDYIQNGSLDSLLFNKNFVLDWDQRFKILKGVVAGLLYLHEEWEQVVIHRDVKSSNILIDVDFNARLGDFGLARLCSHDQVSHTTSVVGTIGYIAPELTRTGKASTSSDVYAFGVLLLEVVAGTRPVGSSGQFFLVDWVLENCQLGQILEVVDPKLDSVYDEEEVELVLKLGLLCTQNKAEYRPSIEQVTRYLNFDDPFPDISDWRYYDSQSSTTSLGFTEAMSSSSYSLASIERNPMSSGR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0632 662 Pfam Protein kinase domain 349 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0632 662 CDD STKc_IRAK 353 614 - -
Pvu10g0632 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Pvu10g0632 662 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 7 652 - -
Pvu10g0632 662 SMART serkin_6 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0632 662 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Pvu10g0632 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 280 IPR013320 -
Pvu10g0632 662 Gene3D - 20 270 - -
Pvu10g0632 662 PANTHER - 7 652 - -
Pvu10g0632 662 SUPERFAMILY Protein kinase-like (PK-like) 330 631 IPR011009 -
Pvu10g0632 662 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Pvu10g0632 662 Gene3D Transferase(Phosphotransferase) domain 1 424 623 - -
Pvu10g0632 662 ProSiteProfiles Protein kinase domain profile. 347 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0632 662 CDD lectin_legume_LecRK_Arcelin_ConA 22 265 IPR001220 GO:0030246
Pvu10g0632 662 Pfam Legume lectin domain 23 274 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0632 Pvu-Chr10 9989769 9992368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0632 24 638 Receptor kinase-like Gene Family AT5G01560 51.424 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu10g0632 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0632 - - vra:106770487 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0963 8 9731145 9733166 Pvu10g0632 10 9989769 9992368 PCT