Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0629 ATGTGGACAAATTATCTAAGAAAGCGTCTTCCACTAACAATAAGGTCTCTTCATACCTTGAAAGGTAATCAATTAGACCAAATTTTAATGTCTCCACCTCTTGCATCTTTGGACCTTCCTGACATCTGGAGTCCTAATCCTTCATCTCGGATTATTCCAGCAATACATAAAAGCTTTGATGACCACACTACTATAGTGCTTGATGGAAAGTTGATATCCATGGAAATCAGATCAAGAATAGCTGCTAAGGTGAGAGAAATGAAGAAATGCCTAGGAGAAATTCCTGGATTAGCCGTAATTTTAGTAGGCCAAAGAAGGGATTCTCGAACTTATGTTCGCAACAAGATAATGGCTTGTGAAGAAGTTGGAATAAAGTCTGTGGTGACTGAATTACCCACTGATTGTGCAGAAATGGATGTTCAAAATGCAATCATGAGATTTAACAAAGATCCATCCATTCATGGTATTCTTGTGCAACTCCCTCTACCAGAACATCTAGATGAGGAAAAGGTTCTGGATGCTTTATGTATTGAGAAAGACGTCGATGGTTTTCATCCCGTTAATATGGGGAATCTTGCCATAAATGGAAGGGACCCACTGTTTACTCCTTGTACTCCAAAGGGCTGCATTGAGTTATTGATCAGATCAGGAGTCGAGATAATGGGGAAGAAAGCCGTAGTGATAGGAAGAAGTAACATAGTTGGTTTGCCAACGTCCTTGTTATTGCAGAGACACCATGCAACAGTCACTGTTATACATGCCTTCACAGAAAACCCTGAACAGATCACCTCAGAAGCTGATATTATAGTTTCAGCTGCTGGAGTGCCTAATTTGGTCCGTGGTAACTGGATAAAACCTGGTGCAACTGTGATCGATGTTGGTACTACTCCTGTGGAGGATTCTGGCTGCGACGATGGTTATCGTCTCGTAGGTGACGTATGCCATGAAGAAGCCATAAAAGTGGCATCTGTTATTACTCCTGTGCCTGGCGGGGTTGGGCCCATGACCGTTGCTATGCTACTATACAACACTCTACTTTCTGCAAAACGCATGCTGAATTTTAATTGA 1068 0.4176 MWTNYLRKRLPLTIRSLHTLKGNQLDQILMSPPLASLDLPDIWSPNPSSRIIPAIHKSFDDHTTIVLDGKLISMEIRSRIAAKVREMKKCLGEIPGLAVILVGQRRDSRTYVRNKIMACEEVGIKSVVTELPTDCAEMDVQNAIMRFNKDPSIHGILVQLPLPEHLDEEKVLDALCIEKDVDGFHPVNMGNLAINGRDPLFTPCTPKGCIELLIRSGVEIMGKKAVVIGRSNIVGLPTSLLLQRHHATVTVIHAFTENPEQITSEADIIVSAAGVPNLVRGNWIKPGATVIDVGTTPVEDSGCDDGYRLVGDVCHEEAIKVASVITPVPGGVGPMTVAMLLYNTLLSAKRMLNFN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0629 355 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 185 350 IPR020631 GO:0004488
Pvu10g0629 355 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 64 183 IPR046346 -
Pvu10g0629 355 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 67 182 IPR020630 GO:0004488
Pvu10g0629 355 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 95 117 IPR000672 GO:0004488
Pvu10g0629 355 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 136 163 IPR000672 GO:0004488
Pvu10g0629 355 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 171 192 IPR000672 GO:0004488
Pvu10g0629 355 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 218 238 IPR000672 GO:0004488
Pvu10g0629 355 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 296 IPR000672 GO:0004488
Pvu10g0629 355 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 308 324 IPR000672 GO:0004488
Pvu10g0629 355 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 325 343 IPR000672 GO:0004488
Pvu10g0629 355 Gene3D - 67 328 - -
Pvu10g0629 355 PANTHER BIFUNCTIONAL PROTEIN FOLD 1, MITOCHONDRIAL 45 354 - -
Pvu10g0629 355 Gene3D Leucine Dehydrogenase, chain A, domain 1 69 345 - -
Pvu10g0629 355 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 329 337 IPR020867 GO:0003824
Pvu10g0629 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 184 349 IPR036291 -
Pvu10g0629 355 Hamap Bifunctional protein FolD [folD]. 64 352 IPR000672 GO:0004488
Pvu10g0629 355 CDD NAD_bind_m-THF_DH_Cyclohyd 177 349 IPR020631 GO:0004488
Pvu10g0629 355 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 45 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0629 Pvu-Chr10 9920998 9924646 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0629 - - gmx:100791604 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0747 8 6897690 6904088 Pvu10g0629 10 9920998 9924646 PCT