Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0613 ATGAGGAGCAGTGTAGGAGATATTGTTCAAGTGGAAGGAGGACACATTGTTAGGTCCACAGGTAGAAAAGATCGACACAGCAAGGTCTATACTTCCAAAGGGCCTCGTGATCGCCGGGTTAGACTCTCAGCACACACAGCCATTGAGTTCTATGACGTTCAAGACAGACTTGGCTATGACAGACCAAGCAAGGCTGTGGACTGGCTCATCAAGAAGGCAAAGTCTTCCATTGACAAGCTTGCGGAGCTTCCTCCATGGCATCCACCTACTCATGAGGAAAAGCAGAATGATGCTGCAGGATCAAGTGGAATCGTGGCAGTTGAACAACAACAAGAACATCATCAACAACAGTCAGAGTCTTGTGGTTACAACTTTCAGCTCCAGAGGCAACTGGGGGCCTTTATTTCAACCCATGTTGACACTGACCCCATCAATTTTCAAACCAACAACTCCTCTGAAGATCTTGGCCTATCTCTCCACTGCTTCCAAGATCAGCCCGGCCTCATTCATTGGCCATCACAACAAGGTGCAAATCAAGCACCTCCTTCAAATGAACACCAAACCCTTTTTGCGGGCTCAATCCCAGTTGGTTTTGAGAACCATTATCAAAGAACCGTGACTTGGAACAATGAAGCAACGACCGGGGATCATGTGAGCAGAATGGGGTTCTTTCTCAACTCACAGACATTTATTAGCCAAGGTTCTGCTTCAGCTTATGCACAAAGTGAGACCCTTCAGTCCAGTTTTTCATTTCCAATGACTTCCTCTGAGCATCAGAGGCCCCAGCCAGTTCACCAACCTTCCTTCTTTGGCAGCAGGTTTGTGTCTGATGGATTAGCTGGGTTCTGCATTCCTGATAGAATTCAAGGTGTGGAAGAGAACAATGGAGTTGCTTCCAATAGGCCATCTTCTTCTCCTAGTTCTATCCACTAA 933 0.4684 MRSSVGDIVQVEGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELPPWHPPTHEEKQNDAAGSSGIVAVEQQQEHHQQQSESCGYNFQLQRQLGAFISTHVDTDPINFQTNNSSEDLGLSLHCFQDQPGLIHWPSQQGANQAPPSNEHQTLFAGSIPVGFENHYQRTVTWNNEATTGDHVSRMGFFLNSQTFISQGSASAYAQSETLQSSFSFPMTSSEHQRPQPVHQPSFFGSRFVSDGLAGFCIPDRIQGVEENNGVASNRPSSSPSSIH* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0613 310 Pfam TCP family transcription factor 21 117 IPR017887 -
Pvu10g0613 310 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 307 IPR005333 GO:0003700
Pvu10g0613 310 MobiDBLite consensus disorder prediction 81 101 - -
Pvu10g0613 310 MobiDBLite consensus disorder prediction 18 37 - -
Pvu10g0613 310 PANTHER TRANSCRIPTION FACTOR TCP4 3 307 - -
Pvu10g0613 310 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0613 Pvu-Chr10 9783070 9785992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0613 5 88 TCP Transcription Factor Family AT3G15030 86.905 2.90e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu10g0613 TCP 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0613 - - vun:114168475 565.844