Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0601 ATGGCTTCTCTGCTCCCTCCAACTCCAACTGCTACTTCCACGCTCAAACACAGCCAAATGGCTTCTCCCTTGAAGCTCACCACACCAAACAATGCTTCTTTCTTGCCAAACTCAAACCACCGTGTGAAGAGCAACTCTGCAAAGTGCCATGCACTGTTTGGTGAGGTGGCCAAAGGGTTGGTGGAGAACAGTGTTGGCATGGACCAGTTTCAAAGTATCCAATCAGGAATAGTGCAGTTTGAAAGAGTGACTGAAAGCTTATCTGACATGCAGAGGTGGGGGGTTCTCGTGTTTGGTGGGTTGACGTGGATTTACCTGACTGCGAGACCAGGTGTGCTTGTTGGTGCCATTGATGCGTACCTTTTGGCCCCTCTTCAACTGGGGTTCGACAGTTTGGTTGGAAGGAGGAACTTGAAGAGGAGTGACTTTGTGGTTGGAGAAAAGCTTGGTGAAGGGTCTTTTGGTGTTGTCTATTCGGGTGTTTTGGTTCCCAAGAATGGGAATGGGAATGGTGGGAGTCTTGATGTTGTGCAGAAGAGGGGGAGAGGCAAGGCAACGCCGGTGGAAGCCAAGTCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTGGGAATTCAAGGCGCTGAGGAGTTTGGTGATTATGAGGAGTGGTTCAATTACAGGCTATCTAGGGCAGCTCCCGAAACATGTGCTGACTTCCTGGGAAGTTTTGTAGCTGATCAAACAAATTCACAGTTTACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCGTACTCTTGGTGATTACATGAAGGATCGCAACTTCCCTTCAAACTTAGAATCTGTGATGTTTGGACGTGTCCTGCAAGGTGTGGACTCTTCAAAAAGAAATGCATTGATCATCAAACAAATAATGCGGCAGATCATTACATCTCTGAGGAAAATTCATGATACTGGCATTGTTCACAGGGATGTAAAGCCAGCCAACTTAGTGGTTACTAAACGAGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGACTTGCGGATTGGAAAGAATTATGTTCCCAACCGTACCCTTTTGGATCCTGACTACTGCCCCCCAGAATTATATGTACTTCCAGAAGAAACACTAAGTCCACCACCAGAACCAATTGCTGCTTTCCTTTCTCCAATCCTTTGGCAGGTATAC 1185 0.4608 MASLLPPTPTATSTLKHSQMASPLKLTTPNNASFLPNSNHRVKSNSAKCHALFGEVAKGLVENSVGMDQFQSIQSGIVQFERVTESLSDMQRWGVLVFGGLTWIYLTARPGVLVGAIDAYLLAPLQLGFDSLVGRRNLKRSDFVVGEKLGEGSFGVVYSGVLVPKNGNGNGGSLDVVQKRGRGKATPVEAKSKDKVILKKVKVGIQGAEEFGDYEEWFNYRLSRAAPETCADFLGSFVADQTNSQFTKGGKWLVWKFEGDRTLGDYMKDRNFPSNLESVMFGRVLQGVDSSKRNALIIKQIMRQIITSLRKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETLSPPPEPIAAFLSPILWQVY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0601 395 Gene3D Phosphorylase Kinase; domain 1 131 257 - -
Pvu10g0601 395 SMART serkin_6 143 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0601 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Pvu10g0601 395 MobiDBLite consensus disorder prediction 1 20 - -
Pvu10g0601 395 Pfam Protein kinase domain 297 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0601 395 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 1 394 - -
Pvu10g0601 395 ProSiteProfiles Protein kinase domain profile. 143 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0601 395 Gene3D Transferase(Phosphotransferase) domain 1 288 394 - -
Pvu10g0601 395 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 1 394 IPR044803 GO:0004674|GO:0009579
Pvu10g0601 395 SUPERFAMILY Protein kinase-like (PK-like) 139 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0601 Pvu-Chr10 9662895 9664966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0601 167 344 MAP Kinase Kinase Gene Family AT4G29810 24.862 3.83e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Pvu10g0601 Pkinase 6.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0601 - - pvu:PHAVU_010G058100g 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0601 10 9662895 9664966 Pvu8g0826 8 7805747 7810334 PCT