Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0600 ATGGAACATAATGCCCCACATGTTCCCCCTTCTGAAACTTCCCATTCTCGCCGCCACAGGGTTCGTCCCAAAAGCAGCGTCCAATTTGATGATAACATCATCATACATGATGACAATGCCAACCTCATCTATGTTAATGATCCCGTCAAGACTAATGAAAAGTATGAGTTTTCTGGGAATGCCATCCGAACCAGCAGATACACTCTTCTCACCTTCTTGCCCAAGAATCTGTTCATTCAGTTTCACCGGGTTGCTTATCTCTATTTCCTTGCCATTGCTGCCCTGAATCAGCTTCCTCCGCTAGCTGTTTTCGGCCGAACCGTCTCCCTTTTCCCCTTATTGTTTGTGCTTTGCGTCACTGCTATCAAGGATGCCTACGAGGATTGGCGCAGGCACAGGTCGGATTGCCATGAAAACAATCGTGAGTGTCTGGTTCTTCAATCGGCTCAGTTCCGTTCCAAGAGATGGAAAAATGTACAGGCCGGTGATGTGGTTAAAATCTTTGCAGATGGGATGATTCCTGCTGACGTGGTCTTGTTGGGAACAAGCGATCCGAGTGGGGTTGCCTATATTCAGACAATGAATTTGGATGGTGAATCGAATTTGAAGACACGGTTTGCCAAGCAAGAAACAGCTTCATTGGTTTTGCCAGATGCTTGTGCTGTCGATGGAGTTATTAGATGTGAGCCACCTAATCGGAATATCTATGAGTTCACTGCCAACATGGAGTTCAATGGCCATAAGATTCCCCTTAACCAGTCAAACATTGTACTGCGTGGTTGCATGCTGAAGAACACGAATTGGATAATTGGTGTTGTGGTCTATGCAGGACAGCAAACAAAAGCAATGATGAACAGCGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAACAGAGAAACTTTGTGGTTGTCAGTTTTTCTTTTTATCATGTGCGCAGTTGTTGCCCTTGGGATGAATCTCTGGCTGATACGCCACGAGGATCAGCTTGATACCTTGCCTTACTACAGAAAAAAATTCTTCGACAATGGGCCAAATGAGGGAAGGAAATACAGGTACTATGGGATAACAATGGAAACATTCTTCTCCTTTTTGAGCTCTATTATTGTGTTTCAGATAATGATACCAATATCTCTATATATCACAATGGAGTTAGTTCGATTGGGTCAGTCGTACTTCATGATAGAGGACAAGGATATGTATGATACTAAATCTGGATCAAGGTTCCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTACGTGTTTTCTGACAAGACAGGAACTCTAACAGAAAACAAAATGGAGTTTCAGAGAGCCAGTATACATGGAAAGAACTACAGGGGCTCCTTGCTTACAGATGATAAAAGTACAGAAGCGGCAGCAGCCAATAATGGTAAACGAAAATGGAACCTCAAATCTGAAATTGCTGTTGATTCTGAACTAATGGCATTGTTGCAGAAAGACTCAAATTTAGATGAAAGAATTGCTGCTCATGAGTTTTTCCTCACATTGGCTGCTTGTAATACTGTGATCCCCATTCTCAGTAGTAGTAAAGTTTCCAGTTGTGAAAAAGATGAATCAAATCAAGACATAGAAGGTATTGATTACCAGGGAGAGTCTCCTGATGAACAAGCTCTAGTTTCAGCTGCATCTGCATATGGATATACTCTATTTGAGCGAACATCTGGAAACGTTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGATGTATTGGGCCTGCACGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTATTATCCGGTTTCCTGATAATGCTGTTAAGGTGTTGGTTAAAGGCGCTGACACTTCTATGTTTAGCATTTTAGCACCTGACTCTGAAGGAAACAATCGCATACAGCATAAAACTCAGAGTCATTTAAATGAATATTCTATGCAAGGTTTACGAACTCTTGTAGTAGGCTCCAGGGATCTTTCAGATGCTGAATTTGAGGAGTGGCAAAACATGTATGAAGATGCAAGCACTTCATTGACTGATCGAGCTGCAAAACTACGTCAAACAGCGGCTCTAATAGAATGCAAGCTAAAGCTACTTGGAGCAACTGGAATTGAGGACAAGCTACAAGAGGGTGTGCCAGAAGCCATTGAGTGCATTCGGGAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACTGCAATTTCAATTGGTCTTTCTTGTAAACTTCTGAATGGAGATATGCAGCAGATAATTATAAATGGCACTTCAGAGGTTGAGTGCAGAAAGCTATTGACTGATGCTATAGCTAAGTATGGGTTACAATCTTCGAGTAGAGAACATCAGAATCTGAAGCGCAAAACTGATTCTAGACATGGTTGCCCTGATATTCACAATGACACAAAATCATTGGGCTTGCCCAAGTCAAATGCAGGAAAGGAAGAAGGAACTACTTCTCAATTGGCACTCATAATTGATGGAACCAGTTTAGTTTATATTTTGGAGAAGGATCTGCAGTCAGAGCTTTTCAACCTTGCAACTTCCTGTAGGGTTGTGCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATAAAAAGCCGCACAGATGATCTGACATTAGCTATTGGTGATGGGGCAAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCTGTTATGGCATCAGATTTTGCTATGGCACAATTCCAGTTCTTGAAAAAATTGCTTCTGGTTCACGGGCACTGGAATTATCAGCGTGTTGGTTATCTAGTTCTGTACAACTTTTACCGCAATGCTGTCTTTGTGTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGAGTGGAGCAGTGTATTTTATTCTGTGATATACACATCTATCCCTACTATCATTATTGGTGTGTTGGACAAAGACTTGAGTCATAGTACACTCTTGCAGTATCCAAAATTATATGGTACAGGTCACAGGCATGAGGCTTACAATTTACAATTATTTTGGATTACAATGATTGACACACTATGGCAGAGTCTTGTTCTCTTCTACATTCCCCTATTCACCTATAAGGACAGCACAATTGATATATGGAGCATGGGCAGTTTATGGACAATTTCAGTTGTTATCCTTGTAAACGTACACCTGGCTATGGACATTAACCAGTGGGCACTGGTTAGTCATGTTGCTGTATGGGGATCAATAATCATTACATATGGCTGCCTGGTGATATTGGATTCTATACCTGCCTTTCCCAATTACGGGACTATTTATCATTTGGCAAGTTCCCCTACATATTGGATGACAATTTTGCTTATAATAGTCGTGGCGTTGCTACCTCGCTTTTCTTGCAAAGCTTTTTATCAAGTCTTTTGTCCTTCCGATATCCAGATAGCTAGAGAAGCTGAGACAATGAGCAAACAGCATGATGATTTGCAATCAAAGTGTCTATTTTCTAAATAA 3540 0.4153 MEHNAPHVPPSETSHSRRHRVRPKSSVQFDDNIIIHDDNANLIYVNDPVKTNEKYEFSGNAIRTSRYTLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDCHENNRECLVLQSAQFRSKRWKNVQAGDVVKIFADGMIPADVVLLGTSDPSGVAYIQTMNLDGESNLKTRFAKQETASLVLPDACAVDGVIRCEPPNRNIYEFTANMEFNGHKIPLNQSNIVLRGCMLKNTNWIIGVVVYAGQQTKAMMNSAASPSKRSKLESYMNRETLWLSVFLFIMCAVVALGMNLWLIRHEDQLDTLPYYRKKFFDNGPNEGRKYRYYGITMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKDMYDTKSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASIHGKNYRGSLLTDDKSTEAAAANNGKRKWNLKSEIAVDSELMALLQKDSNLDERIAAHEFFLTLAACNTVIPILSSSKVSSCEKDESNQDIEGIDYQGESPDEQALVSAASAYGYTLFERTSGNVVIDVNGEKLRLDVLGLHEFDSVRKRMSVIIRFPDNAVKVLVKGADTSMFSILAPDSEGNNRIQHKTQSHLNEYSMQGLRTLVVGSRDLSDAEFEEWQNMYEDASTSLTDRAAKLRQTAALIECKLKLLGATGIEDKLQEGVPEAIECIREAGIKVWVLTGDKQETAISIGLSCKLLNGDMQQIIINGTSEVECRKLLTDAIAKYGLQSSSREHQNLKRKTDSRHGCPDIHNDTKSLGLPKSNAGKEEGTTSQLALIIDGTSLVYILEKDLQSELFNLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMAQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTEWSSVFYSVIYTSIPTIIIGVLDKDLSHSTLLQYPKLYGTGHRHEAYNLQLFWITMIDTLWQSLVLFYIPLFTYKDSTIDIWSMGSLWTISVVILVNVHLAMDINQWALVSHVAVWGSIIITYGCLVILDSIPAFPNYGTIYHLASSPTYWMTILLIIVVALLPRFSCKAFYQVFCPSDIQIAREAETMSKQHDDLQSKCLFSK* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0600 1179 Gene3D - 697 925 IPR023214 -
Pvu10g0600 1179 Gene3D - 544 676 IPR023299 GO:0000166
Pvu10g0600 1179 MobiDBLite consensus disorder prediction 1 25 - -
Pvu10g0600 1179 SFLD p-type atpase 414 936 IPR044492 -
Pvu10g0600 1179 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Pvu10g0600 1179 Pfam Phospholipid-translocating P-type ATPase C-terminal 913 1153 IPR032630 -
Pvu10g0600 1179 MobiDBLite consensus disorder prediction 1 16 - -
Pvu10g0600 1179 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Pvu10g0600 1179 PRINTS P-type cation-transporting ATPase superfamily signature 885 904 - -
Pvu10g0600 1179 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 855 971 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu10g0600 1179 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 362 457 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu10g0600 1179 Pfam E1-E2 ATPase 140 388 - -
Pvu10g0600 1179 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 38 1174 - -
Pvu10g0600 1179 CDD P-type_ATPase_APLT_Dnf-like 59 1045 - -
Pvu10g0600 1179 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Pvu10g0600 1179 SFLD C1.7: P-type atpase like 414 936 - -
Pvu10g0600 1179 Pfam Cation transport ATPase (P-type) 535 622 - -
Pvu10g0600 1179 MobiDBLite consensus disorder prediction 785 803 - -
Pvu10g0600 1179 SUPERFAMILY HAD-like 417 930 IPR036412 -
Pvu10g0600 1179 Gene3D - 117 287 - -
Pvu10g0600 1179 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 714 IPR023299 GO:0000166
Pvu10g0600 1179 SUPERFAMILY Calcium ATPase, transduction domain A 140 283 IPR008250 -
Pvu10g0600 1179 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1160 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Pvu10g0600 1179 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1152 IPR023298 -
Pvu10g0600 1179 MobiDBLite consensus disorder prediction 784 819 - -
Pvu10g0600 1179 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 38 1174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0600 Pvu-Chr10 9654260 9662183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0600 35 1165 Primary Pumps ATPases AT5G04930 56.410 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0600 K14802 - gmx:100788740 2060.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0831 8 7847795 7860261 Pvu10g0600 10 9654260 9662183 PCT