Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0596 ATGGCATCTTCAACAACATTGTGTTTGGGTGTTCTGATTTCTCTGATATTGTTCCATAAGTTGCATGCTTCATCTTCCTTCTCTCTCTCCGTAGAGAAGTTGAATGAAGACGTGATAGTGTCATCACCCAAACCAACATTCACAGCAGGCTTTTACGCCGTCGGACACAACGCTTTCTGCTTCGCAATATGGTACACCAACTCACCCAACACCCTCGTTTGGATCGCCAACCGGGACCACCCCTTTAACGGAAAACGCTCCACCCTCTCCCTTCTCAAATCCGGCAACCTCGTTCTCACCGACGCCGCCCAGTTCCAAGTCTGGTCCACCGCCACCGCCACCACATCCAAACAAGTCCACTTACGTTTGCACGACTCCGGCAACCTCGTACTCCTCGAAGATTCCTCCAACAACACTGTTTTGTGGCAGAGCTTCGATTTCCCAACCGACACGCTTCTTCCAAATCAGCCTCTGAGAGGGAGCACCAACCTGGTTTCCTCCAGAAGCGGGAGCAACCACTCCTCCGGTTTCTACAAGCTCTTCTTCGACTTCGAGAATGTTCTACGCCTCATCTACCAGGGCCCTCGAGTTTCCAGCGTTTTCTGGCCTTACGCTTGGCTTCAGAGCAACAACTTCGGTAATGGCAACGGCAGATCTACTTTCAATGATAGCAGGGTTGCTTTGCTTGATGATTTGGGTGCCGTGCTTTCTTCCGACAACTTCACTTTCAGAACGATCGATTACGGGACGGTGCTTCAGCGGAGATTGACCCTGGATCATGACGGTAATGTGAGGGTGTACACCATGATAGATGGAGAAGAGAAGTGGGTGGTGTCAGGGCTGTTTCGGCAACAACCTTGTTTTATTCATGGCATTTGTGGACCCAACAGCTATTGCACCAATGACCCCACAATTGGAAGAAAGTGTTCCTGCCTTCCAGGTCACAGATGGAATAATACTCAAGACTGGTCTCAAGGTTGCGAACCAAATTTCCAGTCAGGGTGCGGCAACACACCGCAAGAGTCTAACTTCTTGACCTTGCCTCAAACGGACTTTTACGGATACGACTATGGTCTCTATTCGAATCACACGTACCAACAATGTGTGGATGAGTGTTTAAGGTTGTGCGAATGCAAAGGGTTTCAGTTCAACTTTCCGAAGCAAGATGGGCTAGGTAGTCACTGCTACCTCAAGTGGCAGTTACTAAATGGGCATCGTTCAGCGGATTTCGACGGAGCATTCTTCCTGAGACTACCCCGTGACTTTGATGACATAGCAATTGTACGTAATGGCAATGGCATGGTATGTGGGGGGAGTAGTGCAGTAGAGGAAGTTCTAGCGAGACCATATACCAAAGAAAAAGGAAATGAGTTGGTGAAGTTCATGTTGTGGTTTGCGGTTGCCTTAGGTGGAATTGAGGTTGTGTGCATCTTTGTGGTGTGGTGTTTCTTGTTCAGGAAAAATACTGATAAAGAAGGCTATGTTGTTGCCGTGGAAACGGGGTTCAGAAAATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGTTTCAGAGATGAGATTGGAAGGGGTGGTGGTGGAACAGTGTATAAGGGTGTCTTGACAGATAATCTAGTGGTGGCAATAAAGCGTCTGCATGAAGTAGCAAACCAAGGAGAAAGCGAGTTTCTGGCTGAGGTAAGTATCATTGGAAGGCTTAACCACATGAATTTGATTGGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAAAATGGTTCATTGGCTCACAACCTTTCATCAGCTTCAAATGCACTTGACTGGAGAAAAAGGTATAACATTGCTGTGGGAACAGCAAGAGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATCAAGCCTCAAAACATACTTCTTGACTCTGATTATAAACCTAAAGTAGGGGATTTTGGGTTGTCTAAGCTACTTAACCGGAACAATCTTAAGAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTTGATGTGTACAGCTATGGCATTGTTCTCTTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGTCCAATTCACAGAGTTAGAATCAGAGTCAGGTCATAATGAGAGATTGGTGACATGGGTGAGGGAGAAAAAGAGGAAAGGATCAGAAGTGGGACCATCTTGGGTGGATGAGATCGTTGACCCTGCTTTGGGATCAAACTATGACATGAATGAAATGGAGATATTGGCAACGGTGGCTCTGGAATGTGTAGAGGAAGAGAAAAACGTGAGACCCAACATGAGCCAAGTTGCTGAGAGGCTCCAAAATCATGACCATGATTCAAGATAG 2421 0.4663 MASSTTLCLGVLISLILFHKLHASSSFSLSVEKLNEDVIVSSPKPTFTAGFYAVGHNAFCFAIWYTNSPNTLVWIANRDHPFNGKRSTLSLLKSGNLVLTDAAQFQVWSTATATTSKQVHLRLHDSGNLVLLEDSSNNTVLWQSFDFPTDTLLPNQPLRGSTNLVSSRSGSNHSSGFYKLFFDFENVLRLIYQGPRVSSVFWPYAWLQSNNFGNGNGRSTFNDSRVALLDDLGAVLSSDNFTFRTIDYGTVLQRRLTLDHDGNVRVYTMIDGEEKWVVSGLFRQQPCFIHGICGPNSYCTNDPTIGRKCSCLPGHRWNNTQDWSQGCEPNFQSGCGNTPQESNFLTLPQTDFYGYDYGLYSNHTYQQCVDECLRLCECKGFQFNFPKQDGLGSHCYLKWQLLNGHRSADFDGAFFLRLPRDFDDIAIVRNGNGMVCGGSSAVEEVLARPYTKEKGNELVKFMLWFAVALGGIEVVCIFVVWCFLFRKNTDKEGYVVAVETGFRKFSYSELKQATKGFRDEIGRGGGGTVYKGVLTDNLVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLIGMLGYCAEGKHRLLVYEYMENGSLAHNLSSASNALDWRKRYNIAVGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVGDFGLSKLLNRNNLKNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMITGRSPTTGVQFTELESESGHNERLVTWVREKKRKGSEVGPSWVDEIVDPALGSNYDMNEMEILATVALECVEEEKNVRPNMSQVAERLQNHDHDSR* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0596 806 PIRSF SRK 1 805 IPR024171 GO:0004674
Pvu10g0596 806 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 9 805 - -
Pvu10g0596 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 202 IPR036426 -
Pvu10g0596 806 Pfam Protein kinase domain 519 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0596 806 Gene3D - 29 147 IPR036426 -
Pvu10g0596 806 SMART serkin_6 515 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0596 806 Gene3D Phosphorylase Kinase; domain 1 482 590 - -
Pvu10g0596 806 CDD STKc_IRAK 521 800 - -
Pvu10g0596 806 SMART ntp_6 339 418 IPR003609 -
Pvu10g0596 806 ProSiteProfiles PAN/Apple domain profile. 335 419 IPR003609 -
Pvu10g0596 806 Pfam D-mannose binding lectin 71 159 IPR001480 -
Pvu10g0596 806 SMART blect_4 30 148 IPR001480 -
Pvu10g0596 806 ProSiteProfiles Protein kinase domain profile. 515 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0596 806 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Pvu10g0596 806 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Pvu10g0596 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 805 - -
Pvu10g0596 806 CDD B_lectin 41 148 IPR001480 -
Pvu10g0596 806 Gene3D Transferase(Phosphotransferase) domain 1 591 806 - -
Pvu10g0596 806 Pfam S-locus glycoprotein domain 250 316 IPR000858 GO:0048544
Pvu10g0596 806 Gene3D Hepatocyte Growth Factor 345 413 - -
Pvu10g0596 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pvu10g0596 806 SUPERFAMILY Protein kinase-like (PK-like) 495 798 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0596 Pvu-Chr10 9606036 9608979 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0596 505 798 Trihelix Transcription Factor Family AT5G38560 44.108 7.59e-71 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu10g0596 Pkinase 2.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0596 - - gmx:100807333 1241.87