Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0594 ATGTTCTACGCCTCATGTACCAGGGCCCTCGAGTTTCCAACGTTTTCTGGCCTACCCGCTTGGCTTCAGAACAACAACTTCGGTAATGTCAACGGCAGATCCACTTTCAACGATAGCAGGGTTGTTGTGCTTGATGATTTGGGCGCCGTGCTTTCTTCCGACAACTTCACTTTCAGAACGAGCGATTACGGTACGGTGCTTCAGCGGAGATTGACCCTGGATCATGACGGCAATGTGAGAGTGTACAGCATGATAGATGGAGAAGAGAAGTGGGTGGTGTCAGGGATGTTTCGGCAACAACCTTGTTTAATTCATGGCATTTGCGGACCCAACAGTTATTGCACCAATGACCCCACAATGGGAAGAACGTGTTCCTGCCTTCCAGGTCACAGATGGAAAAATACTCAAGACTGGTCTCAAGGTTGCGAACCAAATTTCCAGTCTTGGTGCGGCAACACTCCGCCAGAGTCTAACTTCTTGACCTTGCCTCAAATGGAGTTTTACGGATACGACTATGGTCTCTATTCGAATCACACGTACCAACAATGTGTGGATCAGTGTTTAAGGTTGTGCGGATGCAAAGGGTTTCAATTCAACTTTCCGGAGAAAGATGCGGTTAGTAGTAACTGCTACCTCAAGACGCAGTTACGAAATGGGCATCGTTCAGCGGGTTTCGACGCAGCATTCATCCTGCGACTGCCCCGTAACTTTGATGACATACTAATTGTACATAATGGCAATGCCATGGTATGTGGGGGGAGTAGTGCAGTAGAGGAAGTTCTAGCGAGACCATATACCAAAGAAAAAGGAAATGAGTTGGTGAAGTTCATGTTGTGGAAAAATACTGATAAAGAAGGCTTTGTTGTTGCAGCTGCAACGGGGTTTAGGAAATTCACTTACTCTGAACTGAAACACGCAACTAAAGGTTTCAGTAAAGAGATTGGAAGGGGGGGTGGAGGTACCGTGTATAAAGGTTTCTTGTCTGATGATCGAGTTGTGGCAATAAAAAGACTACATGAAGTAGCAAACCAAGGAGAGAGTGAGTTTCTGGCTGAAGTAAGCACCATTGGAAGGCTTAACCACATGAATTTAATTGCCATGTTGGGGTATTGTGCAGAGGGAAAACATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCAAAACCTTTCGTCAGATTCAAATGCACTTGATTGGAGCAGAAGGTACAACATTGCTGTGGGGACAGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGAATTTGCATTGTGACATCAAGCCTCAAAACATACTTCTTGACTCCGATTATAAACCAAAAGTAGGGGATTTTGGGTTCTCTAAGCTACTCAACCGGAACAATCTTAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTTGATGTGTACAGCTATGGCATTGTTCTCTTGGAGATGATCTCTGGAAGGAGCCCAACAACAGGTGTCCAATTCACAGAGTCAGAATCAGAGTCAGGTCATCATGAGAGAGTGGTGACATGGGTGAGGGAGAAAAAGAGGAAAGGATCAGAAGTGGGAGCATCTTGGATATTGGCAACGGTGGCTCTGGAATGTGTAAAGGAAGAGAAAAACGTGAGACCCAACATGAGCCAAGTTACTCAGAGGCTCCAAAATCATGAACATGATTCTTAA 1740 0.4517 MFYASCTRALEFPTFSGLPAWLQNNNFGNVNGRSTFNDSRVVVLDDLGAVLSSDNFTFRTSDYGTVLQRRLTLDHDGNVRVYSMIDGEEKWVVSGMFRQQPCLIHGICGPNSYCTNDPTMGRTCSCLPGHRWKNTQDWSQGCEPNFQSWCGNTPPESNFLTLPQMEFYGYDYGLYSNHTYQQCVDQCLRLCGCKGFQFNFPEKDAVSSNCYLKTQLRNGHRSAGFDAAFILRLPRNFDDILIVHNGNAMVCGGSSAVEEVLARPYTKEKGNELVKFMLWKNTDKEGFVVAAATGFRKFTYSELKHATKGFSKEIGRGGGGTVYKGFLSDDRVVAIKRLHEVANQGESEFLAEVSTIGRLNHMNLIAMLGYCAEGKHRLLVYEYMENGSLAQNLSSDSNALDWSRRYNIAVGTARGLAYLHEECLEWNLHCDIKPQNILLDSDYKPKVGDFGFSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMISGRSPTTGVQFTESESESGHHERVVTWVREKKRKGSEVGASWILATVALECVKEEKNVRPNMSQVTQRLQNHEHDS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0594 579 Gene3D Hepatocyte Growth Factor 160 228 - -
Pvu10g0594 579 SUPERFAMILY Protein kinase-like (PK-like) 291 572 IPR011009 -
Pvu10g0594 579 Pfam S-locus glycoprotein domain 55 132 IPR000858 GO:0048544
Pvu10g0594 579 Gene3D Transferase(Phosphotransferase) domain 1 384 579 - -
Pvu10g0594 579 ProSiteProfiles Protein kinase domain profile. 308 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0594 579 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 281 579 - -
Pvu10g0594 579 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 20 279 - -
Pvu10g0594 579 Pfam Protein kinase domain 311 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0594 579 Gene3D Phosphorylase Kinase; domain 1 274 383 - -
Pvu10g0594 579 ProSiteProfiles PAN/Apple domain profile. 150 234 IPR003609 -
Pvu10g0594 579 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 281 579 - -
Pvu10g0594 579 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 20 279 - -
Pvu10g0594 579 SMART serkin_6 308 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0594 579 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0594 Pvu-Chr10 9528286 9531642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0594 298 576 Trihelix Transcription Factor Family AT5G38560 40.753 6.52e-63 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu10g0594 Pkinase 2.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0594 - - gmx:100807333 867.07