Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0593 ATGGCATGTTCAAGAGTGTGTTTGGGTGTTCTGATTTCTCTGATATTGTTCCATAAGTTGCATGCTTCATCTTCCTTGTCTCTCTCCGTAGAGAAGTTGAAAGAAGACGTGATAGTGTCATCACCCAAACCAACATTCACAGCAGGCTTTTACGCCGTCGGACACAACGCTTTCTGCTTCGCAATATGGTACACCAACTCACCCAACACCCTCGTTTGGATCGCCAACCGGGACCACCCCGTTAACGGAAAACGCTCCACCCTCTCTCTTCTCAAATCCGGCAACCTCGTTCTCACCGACGCCGCCCAGTTCCAAGTCTGGTCCACCGCCACTGCCACCACATCCAAACAAGCCCACTTACGTTTGCACGACAACGGCAACCTCGTACTCCTCGAAGATTCCTCCGACAACGCTGTTTTGTGGCAGAGCTTTGATTTCCCAACCGACACGCTTCTTCCAAATCAGCCTTTGAGAGGGAGCACCTACCTGGTTTCCTCCAGAAGCGGGAGCAACTACTCTTCCGGTTTCTACAAGCTCTTCTTCGACTTTGAGAATGTTCTACGCCTCATGTACCAGGGCCCTCGAGTTTCCAGCGTTTTCTGGCCTTACGCTTGGCTTCAGAGCAATAACTTCGGGAATGGAAACGGCAATGGTAGATCCATTTTCAACGATAGCAGGGTTGTTGTGGTGGATGATTTGGGCTATTTGGTTTCTTCTGATAACTTCACTTTCAAAACAAGTGATTACGGAATGATACTCCTACGCAGATTGACCCTGGATCACGACGGCAATGTTCGTTTGTATAGCATGAAAGACGGAGAAAACAAGTGGTCTGTGTCAGGACTATTTCGGCGACAACCTTGTTTTATTCATGGAATTTGTGGACCCAACAGTATTTGCAGCTATGAGCCAAGAATAGGAAGAAAGTGTTCCTGTAGTCCAGGATATAGATGGTTTGATAGTGAAGACTGGTCTCAAGGTTGCATACCCAGTTTCCAACTTTGGTGCAACAATAACACTGAGCAAAAGTCTCGCTTTCTAAGCTTACCTGGAGTTGATTTTTACGGATATGACTATGGTCTCTTTGAGAATCACACGTACCAACAATGCGTGAGTCTGTGCTCGCGGTTGTGCGAATGCAAAGGGTTTCAGCACAGCACTTCGAGGAGTGTTAATGGTCAGTGCTATGTCAAGACACAGTTGTTAAATGGTCATCGTTCACCGAGTTTCACCAACTCATTTTTCCTGAGACTGCCTTATCACCTCCATGACTATGATGACAGCCCTAACAATAATGGTTTGGTTTGTGGAAGAAATGGTGTAGTAGTTAAAGTACTTGAGAGACCTTACGTAGAAGAAAAAGAAAACGAGTTGGTGAAGTTCATCTTATGGTTTGCGATTGCCTTCGGAGGTATTGAGGTCGTGTGCATCTTTATGGTGTGGTGTTTATTGTTTAGGAAAAACGGGATGTTACCTAGAGAAGGTTATGTTCTTGCAGCTGCAACGGGGTTTAGGAAATTCAATTACTCTGAACTGAAACATGCAAGTAAAGGTTTCAGTGAAGAGATTGGAAGGGGGGGTGGAGGTACCGTGTATAAAGGTTTCTTGTCTGATGCTCGAGTTGTGGCAATAAAAAGACTACATGAAGTAGCAAACCAAGGAGAGAGTGAGTTTCTGGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAATTTGATTGGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAAACTGGTTCTTTGGCTCAGAATCTCTCGTCAAATTCAAATGAGCTTGACTGGAGTAAAAGGTATAACATTGCTGCGGGAACAGCAAGGGGTCTAGCCTACTTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATCAAGCCTCAAAACATACTTCTTGACTCTGATTATAAACCAAAAGTAGGGGATTTTGGGTTGTCTAAGCTACTTAACCGGAACAATCTTAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTTGATGTGTACAGCTATGGCATTGTTCTCTTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGTCCAATTCACAGAGTTAGAAGCAGAGTCAGGTCATCATGAGAGATTGGTGACATGGGTGAGGGAGAAAAAGAAGAAAGGATCAGAAGTGGAACCATCTTGGGTGGATGAGATCGTTGACCCTGCTTTAGGATCAAACTATGTCATGGATGAGATGGAGATATTGGCAACGTTGGCTTTGGAATGTGTAAAGGAAGACAGAGAGGGGAGACCTAACATGAGTCATGTTGCTGAGAGGCTCCAAATTCATGAACATGATCTTAATGGCCTGAACAAAGATTAG 2442 0.448 MACSRVCLGVLISLILFHKLHASSSLSLSVEKLKEDVIVSSPKPTFTAGFYAVGHNAFCFAIWYTNSPNTLVWIANRDHPVNGKRSTLSLLKSGNLVLTDAAQFQVWSTATATTSKQAHLRLHDNGNLVLLEDSSDNAVLWQSFDFPTDTLLPNQPLRGSTYLVSSRSGSNYSSGFYKLFFDFENVLRLMYQGPRVSSVFWPYAWLQSNNFGNGNGNGRSIFNDSRVVVVDDLGYLVSSDNFTFKTSDYGMILLRRLTLDHDGNVRLYSMKDGENKWSVSGLFRRQPCFIHGICGPNSICSYEPRIGRKCSCSPGYRWFDSEDWSQGCIPSFQLWCNNNTEQKSRFLSLPGVDFYGYDYGLFENHTYQQCVSLCSRLCECKGFQHSTSRSVNGQCYVKTQLLNGHRSPSFTNSFFLRLPYHLHDYDDSPNNNGLVCGRNGVVVKVLERPYVEEKENELVKFILWFAIAFGGIEVVCIFMVWCLLFRKNGMLPREGYVLAAATGFRKFNYSELKHASKGFSEEIGRGGGGTVYKGFLSDARVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLIGMLGYCAEGKHRLLVYEYMETGSLAQNLSSNSNELDWSKRYNIAAGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVGDFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMITGRSPTTGVQFTELEAESGHHERLVTWVREKKKKGSEVEPSWVDEIVDPALGSNYVMDEMEILATLALECVKEDREGRPNMSHVAERLQIHEHDLNGLNKD* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0593 813 CDD STKc_IRAK 523 801 - -
Pvu10g0593 813 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Pvu10g0593 813 PIRSF SRK 1 810 IPR024171 GO:0004674
Pvu10g0593 813 CDD B_lectin 40 147 IPR001480 -
Pvu10g0593 813 Pfam D-mannose binding lectin 70 157 IPR001480 -
Pvu10g0593 813 CDD PAN_AP_plant 332 419 - -
Pvu10g0593 813 Gene3D Hepatocyte Growth Factor 347 414 - -
Pvu10g0593 813 Gene3D - 22 145 IPR036426 -
Pvu10g0593 813 Gene3D Phosphorylase Kinase; domain 1 492 592 - -
Pvu10g0593 813 SMART ntp_6 341 418 IPR003609 -
Pvu10g0593 813 Gene3D Transferase(Phosphotransferase) domain 1 593 810 - -
Pvu10g0593 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 199 IPR036426 -
Pvu10g0593 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 806 - -
Pvu10g0593 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Pvu10g0593 813 SUPERFAMILY Protein kinase-like (PK-like) 502 805 IPR011009 -
Pvu10g0593 813 Pfam Protein kinase domain 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0593 813 Pfam S-locus glycoprotein domain 241 317 IPR000858 GO:0048544
Pvu10g0593 813 SMART serkin_6 517 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0593 813 SMART blect_4 29 147 IPR001480 -
Pvu10g0593 813 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Pvu10g0593 813 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 8 806 - -
Pvu10g0593 813 ProSiteProfiles Protein kinase domain profile. 517 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0593 813 ProSiteProfiles Bulb-type lectin domain profile. 24 143 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0593 Pvu-Chr10 9518352 9521240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0593 507 811 Trihelix Transcription Factor Family AT5G38560 44.156 1.79e-71 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu10g0593 Pkinase 1.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0593 - - gmx:100786566 1271.91