Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0590 ATGCAAATGGCATGTTCAAGAGTGTGTTTGGGTGTTCTGATTCCTCTGATATTGTTCCATAAGTTGCATGCTTCATCTTCCTTGTCTCTCTCCGTAGAGAAGTTGAAAGAAGACGTGATAGTGTCATCACCCAAACCAACATTCACAGCAGGCTTTTACGCCGTCGGACAAAACGCTTTCTGCTTCGCAATATGGTACACCAACTCACCCAACACCCTCGTTTGGATCGCCAACCGGGACCACCCCGTTAACGGAAAACGCTCCACCCTCTCCCTTCTCAAATCCGGCAACCTCGTTCTCACCGACGCCGCCCAGTTCCAAGTCTGGTCCACCAACACTGCCGCCACATCTAAACAAGTCCAGTTACGTTTGCAAGACAACGGCAACCTCGTACTCCTCGAAAGCCAGAACATTTCCTCCGACGTTGTGATATGGCAGAGCTTCGATTTCCCAACCGACACGCTTCTTCCTGGTCAAGCTCTCACGAAGAGCACCAGCCTGGTTTCTTCGAGAAGCGGGAGCAACCACTCCTCCGGTTTCTACAAGCTCTTCTTCGACTCCGAGAATGTTCTTCGCATCATGTACGAGGGTCCTCAAGTTTCCAGCGTTTATTGGCCTGACCCTTGGCTTCAGAACAACAACTTCGGAAACGGTGGCACGGGAAATGGTAGATCCACTTACAACGATAGCAGGGTCGCGGTGCTTGATGATTTCGGCTACTTGGTTTCTTCCGATAACTTCACTTTCAGAAGCATTGACTACGGGGCGGTGCTGAAACGGAGGTTGACCCTCGATCACGACGGTGGTGCGAGGTTGTACAGCAAGAACGATGGGGAAGAGAATTGGACAATGTCAGGGGAATTTCGTTCACATCCTTGCTACGTTCATGGGATTTGTGGGGCTAACAGCTATTGCAGATACGACCCTCCCAGTGGTCGAAAGTGTTCGTGCCTTCCAGGTCATTCGTGGGTTGATAGTGAAGACTGGTCACAAGGTTGCAAACCAACTTTCCAACATTTGTGCAGCAAAAAGAACAGCACCGACGAGTATGAGGCTCGCTTCCTGCACATACCTGATGTTGATTTCTACGGATACGACCTTGGCTACTTTGGAAATTACAGCTACCAACAGTGTGAGAGTCTCTGCAAGCAGTTGTGCGAATGCAAAGGGTTTCAACACAGCTTTTCAGACGAAAATGCTTTCTTTCAGTGCTACCCAAAGACGCATTTGCGTAATGGGAATAGTCAACCAGGTTTCAAGGGATCATTCTTCCTCAGACTTCCTTTATCGTCTCGTGATGAGTACGAGAACACCATCCAAAATAATGGCTTGGTTTGTGGGGGAGATACTGAGGGCTCAGAGCTGCTTAAAAGATCGTATGTTCAAGGGGGAGAAAATGGATCGGTTAAGTTCATGCTGTGGTTTGCAAGCGTTTTGGGGGGAGTTGAGCTGGTGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAATAATAGAACGTTACCCTCAGGGGCTGAAGGACAAGGGTATGTTCTTGCAGCAGCTGCGGGGTTCAGGAAATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGTTTCAGCGAAGAGATTGGAAGGGGTGGTGGTGGTACAGTGTATAAGGGTGTCTTGACAGATAATCAAGTGGTGGCAATAAAGCGTCTTCATGAAGTAGCAAACCAAGGAGAAAGCGAGTTTCTGGCTGAGATAAGCATCATTGGTAGGCTTAACCACATGAACTTAATATCCATGTTGGGGTATTGTGCGGAAGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCACAACCTTTCATCAGCTTCAAATGCACTTGACTGGAGCAAAAGGTATAACATTGCTGTGGGAACAGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGGTTTTGCATTGTGACATCAAGCCTCAAAACATACTTCTTGACTCTGATTATAAACCAAAAGTAGGGGATTTTGGGTTGTCTAAGCTACTTAACCGGAACAATCTTAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTTGATGTGTACAGCTATGGCATTGTTCTCTTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGTCCAACTCACAGAGTTAGAAGCAGAGTCACCTCATCATGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGATGAAAGGATCAGAAGTTGGATCATCTTGGGTGGATCAAATCGTTGACCCTGCTTTGGGATCAAACTATGACATGAATGAAATGGAGATATTGGCAACAGTGGCTTTGGAATGTGTAGAGGAAGAGAAAAATGCTAGGCCCAGCATGAGTCGAGTAGCAGAGAAGCTGCAGGGTCATCACACGATTGTTGATGCTTTGAACAAAGAATAG 2484 0.4706 MQMACSRVCLGVLIPLILFHKLHASSSLSLSVEKLKEDVIVSSPKPTFTAGFYAVGQNAFCFAIWYTNSPNTLVWIANRDHPVNGKRSTLSLLKSGNLVLTDAAQFQVWSTNTAATSKQVQLRLQDNGNLVLLESQNISSDVVIWQSFDFPTDTLLPGQALTKSTSLVSSRSGSNHSSGFYKLFFDSENVLRIMYEGPQVSSVYWPDPWLQNNNFGNGGTGNGRSTYNDSRVAVLDDFGYLVSSDNFTFRSIDYGAVLKRRLTLDHDGGARLYSKNDGEENWTMSGEFRSHPCYVHGICGANSYCRYDPPSGRKCSCLPGHSWVDSEDWSQGCKPTFQHLCSKKNSTDEYEARFLHIPDVDFYGYDLGYFGNYSYQQCESLCKQLCECKGFQHSFSDENAFFQCYPKTHLRNGNSQPGFKGSFFLRLPLSSRDEYENTIQNNGLVCGGDTEGSELLKRSYVQGGENGSVKFMLWFASVLGGVELVCIFLVWCFLFRNNRTLPSGAEGQGYVLAAAAGFRKFSYSELKQATKGFSEEIGRGGGGTVYKGVLTDNQVVAIKRLHEVANQGESEFLAEISIIGRLNHMNLISMLGYCAEGKHRLLVYEYMENGSLAHNLSSASNALDWSKRYNIAVGTARGLAYLHEECLEWVLHCDIKPQNILLDSDYKPKVGDFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMITGRSPTTGVQLTELEAESPHHERLVTWVREKRMKGSEVGSSWVDQIVDPALGSNYDMNEMEILATVALECVEEEKNARPSMSRVAEKLQGHHTIVDALNKE* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0590 827 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 10 818 - -
Pvu10g0590 827 PIRSF SRK 1 827 IPR024171 GO:0004674
Pvu10g0590 827 Gene3D Phosphorylase Kinase; domain 1 505 606 - -
Pvu10g0590 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 208 IPR036426 -
Pvu10g0590 827 Pfam D-mannose binding lectin 72 164 IPR001480 -
Pvu10g0590 827 Gene3D Transferase(Phosphotransferase) domain 1 607 825 - -
Pvu10g0590 827 SUPERFAMILY Protein kinase-like (PK-like) 515 814 IPR011009 -
Pvu10g0590 827 CDD STKc_IRAK 537 816 - -
Pvu10g0590 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Pvu10g0590 827 CDD PAN_AP_plant 341 428 - -
Pvu10g0590 827 ProSiteProfiles Bulb-type lectin domain profile. 26 145 IPR001480 -
Pvu10g0590 827 SMART serkin_6 531 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0590 827 Pfam S-locus glycoprotein domain 257 321 IPR000858 GO:0048544
Pvu10g0590 827 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 10 818 - -
Pvu10g0590 827 ProSiteProfiles Protein kinase domain profile. 531 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0590 827 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Pvu10g0590 827 CDD B_lectin 42 151 IPR001480 -
Pvu10g0590 827 Pfam Protein kinase domain 534 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0590 827 SMART blect_4 31 151 IPR001480 -
Pvu10g0590 827 Gene3D - 25 150 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0590 Pvu-Chr10 9446335 9449423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0590 521 825 Trihelix Transcription Factor Family AT5G38560 42.857 1.87e-73 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu10g0590 Pkinase 5.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0590 - - pvu:PHAVU_010G057000g 1627.84