Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0575 ATGGCTTCTAATGCCATCCTCCAACACACCTCTTCTTCATCTCATGCAACTCACATCTACGACGTATTTGTCAGCTTTCGCGGTGAAGACACGCGCAACAGTTTCACTGGCTTTCTCTTTGGTCATCTCTGTACAAAAGGCATCAATGTGTTCAAAGACGATGAAGATCTCAAAAAGGGTGAATCCATTGCACCCGAGCTGCTGCAAGCCATTCAAGCCTCTCGACTTTTCATTGTTGTCTTCTCTGAGAACTATGCTTCCTCCACTTGGTGCTTGCGTGAACTGGCGGAGATACGTAACTGCGTTGAAACTTCACCAAGACCTGTTATTATACCTATTTTTTATGATGTTGATCCTTCGGTGGTGCGCAAACAGAGTGGATCTTATGAGAAAGCATTTGCAGACCACGAAAAGAGATTCAGAAAAGATGCAGTGAAGATGGAGGAAGTTCAGAGATGGAGAGAGGTTCTCACACAAGTGGCCAATATCGCTGGCTGGGATATCCGAAATAAGTCACAGTGTGAACAAATTGGAGAAATTGTTCAAACCATAATAAATATTTTGGGTCCCAAAATGTCAAGACTTCCGAAGGATGAAATGGTTGGGATAGAGTTTCGGGTTCAAGAATTAAAAAATCTTCTACGTTTAGATTTGGTTAATGATGTTCGAGTTGTCGGAATTAGTGGGATGGGTGGCATAGGAAAGACCACTCTTGCTCGGGCTTTATATGAAAGAATCTATCATCAATATGATTTTTGTAGTTTTATTGATGATGTGAGCAAAATTTATCGAGATTCTAGTTCATTGGGTGTACAAAAGCAGCTAATTTCCCAGTCTCTAAATAAGAAAAATCTTGAAATTTGTAATGTTATTGATGGAACATATTTGGTGTGGACTAGGCTGCACAATGCACGAACACTTCTAGTTCATGACAATGTTGATCAAGTTGAACAACTTAAGTTATTCACAGGGAAAAGAGATATACGTAGATGTGTAGGTGGAGGGAGTAGAATCATTATAATTTCAAGGAATGAACATATATTGAAGACACATGGAGTGGATGATGTTTATCAAGTCCAGTTGTTGAGTTGGGAAAATGCTCTGCAGTTGTTTTGTATAAATGCTTTTAAAGTTAATTATATATTGGATGATTATGAAGAGTTGGCACGTGAGGTACTTTCACATGCTCAAGGTCATCCCTTGGGAATTGAAGTATTGGATCTTCTTTGTTTGGTCGAAATGTGTCACAATGGAGAAGTGCATTGGCCATTGCACAATTTGAAGCTTTTGGATCTCTCTTACTCCAAAGATTTAGTTGAGATGCCGGATGTTAGAGAGGCCCTAAATCTTGAAAAGATAGAACTTAAAGGATGTATAAAACTCCCAAAAATCAATCCATCGATCGGTCTTTTAAAAAAGCTTGCCTTTTTGAATTTGGGAAACTGCAAAAACCTATTGAGTTTCCTAGAACACCTAAATTTGGAGGGAAACAATTTTACCACACTTCCGAACCTCAATAACCTTTTCAGACTATATCATTTAAACTTACAACATTGCAAGCGATTCAAACACTTTCCTGTTCTCCCTTCGCAAACCGACTTGCCCTCAGAAACTTGCAAGCTTCCACTACCATATTTGACACATGAAGATCTGGTAGGACTAATCCTTTATAACTGTAAAGAATTAGTTGAAAGGGAACACTGTTGTAGCATGATTTTTTCGTGGATGATACAAATTTTTCAGTCTTACGAGGCGAGGTGCTTAGGAAACACATGTAGTCTCAAATTACGTCCAAATATTGCATGTGTTATCCCGGGAAGTGAAATACCGAGGTGGTTCAACAATCAATATGTCAGCATGGACAATTCAATAAGGATTGATACCTCTCCTGTTATGCATGACAACAATTGGATTGGTGTTATGTGTTGTGCAATATTTCACATGGACATTGAAAAGGACATGACTGGTTATAGATCCATAGATCGTAGTGCTAGAATTCCTCCAATCGATTTAAGAAGCGATCTAGTCATTGACCATTTAGATCAAATGTGGCTATTTTATTTATCTCATCAAGAGTTTGGTGAACGACGTTATGATTGCAGATGGTACACATCTTATAATGGTGTTATTAGTGTGGAGTTTACAAAATTGATGATGGACAAAAGCGAATTCGAGAAGGGAGAACCCCAATATGTTAAGGTGTATGTGAAGAAATATGGGTATCGGATCAAGGGTAGACATCCCACAATTCTTTGGAACATCGTTACACGAGTACTCCTCTAA 2283 0.3868 MASNAILQHTSSSSHATHIYDVFVSFRGEDTRNSFTGFLFGHLCTKGINVFKDDEDLKKGESIAPELLQAIQASRLFIVVFSENYASSTWCLRELAEIRNCVETSPRPVIIPIFYDVDPSVVRKQSGSYEKAFADHEKRFRKDAVKMEEVQRWREVLTQVANIAGWDIRNKSQCEQIGEIVQTIINILGPKMSRLPKDEMVGIEFRVQELKNLLRLDLVNDVRVVGISGMGGIGKTTLARALYERIYHQYDFCSFIDDVSKIYRDSSSLGVQKQLISQSLNKKNLEICNVIDGTYLVWTRLHNARTLLVHDNVDQVEQLKLFTGKRDIRRCVGGGSRIIIISRNEHILKTHGVDDVYQVQLLSWENALQLFCINAFKVNYILDDYEELAREVLSHAQGHPLGIEVLDLLCLVEMCHNGEVHWPLHNLKLLDLSYSKDLVEMPDVREALNLEKIELKGCIKLPKINPSIGLLKKLAFLNLGNCKNLLSFLEHLNLEGNNFTTLPNLNNLFRLYHLNLQHCKRFKHFPVLPSQTDLPSETCKLPLPYLTHEDLVGLILYNCKELVEREHCCSMIFSWMIQIFQSYEARCLGNTCSLKLRPNIACVIPGSEIPRWFNNQYVSMDNSIRIDTSPVMHDNNWIGVMCCAIFHMDIEKDMTGYRSIDRSARIPPIDLRSDLVIDHLDQMWLFYLSHQEFGERRYDCRWYTSYNGVISVEFTKLMMDKSEFEKGEPQYVKVYVKKYGYRIKGRHPTILWNIVTRVLL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0575 760 ProSiteProfiles Leucine-rich repeat profile. 488 509 IPR001611 GO:0005515
Pvu10g0575 760 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 408 - -
Pvu10g0575 760 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 428 494 - -
Pvu10g0575 760 SMART till_3 19 163 IPR000157 GO:0007165
Pvu10g0575 760 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 408 IPR044974 GO:0006952
Pvu10g0575 760 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 428 494 IPR044974 GO:0006952
Pvu10g0575 760 Gene3D Ribonuclease Inhibitor 398 539 IPR032675 -
Pvu10g0575 760 Pfam TIR domain 20 188 IPR000157 GO:0007165
Pvu10g0575 760 Pfam NB-ARC domain 218 406 IPR002182 GO:0043531
Pvu10g0575 760 PRINTS Disease resistance protein signature 224 239 - -
Pvu10g0575 760 PRINTS Disease resistance protein signature 300 314 - -
Pvu10g0575 760 PRINTS Disease resistance protein signature 396 410 - -
Pvu10g0575 760 PRINTS Disease resistance protein signature 506 522 - -
Pvu10g0575 760 Pfam C-JID domain 604 695 IPR045344 -
Pvu10g0575 760 ProSiteProfiles TIR domain profile. 18 188 IPR000157 GO:0007165
Pvu10g0575 760 Gene3D - 192 356 IPR027417 -
Pvu10g0575 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 411 IPR027417 -
Pvu10g0575 760 SUPERFAMILY L domain-like 419 532 - -
Pvu10g0575 760 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 166 IPR035897 -
Pvu10g0575 760 Gene3D - 14 191 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0575 Pvu-Chr10 8879057 8883704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0575 424 526 WRKY Transcription Factor Family AT4G12020 37.864 4.10e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0575 - - pvu:PHAVU_010G055500g 1509.58