Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0574 ATGCAGTTGTTTTGTAAAAATGCTTTCAAAGTTAATTATATATTGGGTGATTATTTAGACTTGGCATGTGAGGTACTTTCTCATGCTCAAGGACATCCCTTGGCAATTGAAGTAATTGGGTCCTCTTTGTTTGGTCGAAATGTCTCACAATGGAGAAATGCATTGGATAGGCTAAGACATAATAAGGATATAAATATTATGGATGTTTTAAGTATAAGTTTTGATCACCTGGGAGAAGACAAAGAAGAAATATTTCTAGATATTGCATGCTTCATTGCTGGTAATATTCATGGTAAGGGTGATGTGGAGAAATTCTTAAGCTTTCGTGGATTTGATTACGAAAATGGCATACCAGCTTTAATTGAGAAATCTCTAATAACATGTGAATATGGGGATATTCATATGCATAGGTTGTTGATGGATTTGGGAAAGAGTATTGTCAAAGAAAAATCACCTAAGAAGCCTCTAAAGTGGAGTAGGTTGTGGGATTACAAAGATTTCGAGAAAGCTATGTTAGACGATCAGGCAACTGAAAATCTTGAAGTCATATATATTGAAAAACGCCTTAAGTTGCTTCATCTTAAAGATGTGAAATTTTCAGGAAGTCTCAATCATCTTTCGAATGAACTAGCATATCTTAATTGGAGGGAATATCCTTTTAAATGTTTGCCTAAAAGTTTTCAACCAGAAAAACTAGTCGAGTTACACCTTTTTTGGAGCAATATTAAACAACTATGGAAAGGCACAAAGCCATTGCCCAATTTAAAGCTTTTGAATCTCTCTTTCAACAAATATCTAGTTGAGATGCCGGATGTTAGAGAGGCCCTAAATCTTGAAAAGATATATCTTGAAGGATGCATAAATCTCGAAAAACTAAATCCATCGATCGGTCTTTTGAGAAATCTTGCTATTTTGAATTTGAGAAACTGCAAAAACCTAGTAAGCTTATCCAATACCATATTGGGGCTGGATTCTCTTGAATATTTGAATGTCTCTGGATATGAACAAAGGAACACAAATCATTTGAAGAAGCTTTGTTTAGCAGAAGCTCATATTCTTTCCCAGTCAACATCCTTTTTCAGAAACAAAATGTTGTTGCGGCCTTCAAATTTGTTGTTGCCTTCCATTCCTACTTCCCCTTGTTTTCTCATTTGTTTGCGTGAACTTGATCTAAGCTTTTGTAACTTAGTTCGAATCCCTGATATCATTGGGAAGTTAAGGTGCCTTGAACAGCTAAATTTGAAGAGAAACAATTTTACTACACTTCCCAACCTGCATAACCTTTTCAGATTGTATCATTTAAACTTACAACATTGCAAGCAGTTCACACGCTTGCCTGTTCTCCCTTTGCAAACCGACTGTTCCTTAGAAATTTTCAAGCTTCCACTATCGTATTACGAAGATGAAGATCTGGTAGGATTAATGATTTACAACTGCCCAAAATTAGTTGAGAGGGAACACTGTACAAGCTTTATTTTTTCGTGGATGATTCAAATTTTTCAGATACGGACGCTTAACTCTGTAGTCTCTAAAATTCCTCCAGTCGATTTGAGAGGAGATCTAGTGATTGACCAGTCATATCATTTGTGGCTATTTCATTTGTCTTGTCAAGAGTTTTGTGCAGGACATTCTAATTGGAGATGGGACTGGAGCCAAATCGGCTCGATAGAAAGGCAAAATGTTAAGGCCTATATAAATAAATATGGGTATCGGTGGGTATATGAGCAAGATCGACAACTGTCAAACTCAGTAGATGTGAAGGTTCATTTAACAAAGGCAAAAGGAAAACACAATTAA 1797 0.3578 MQLFCKNAFKVNYILGDYLDLACEVLSHAQGHPLAIEVIGSSLFGRNVSQWRNALDRLRHNKDINIMDVLSISFDHLGEDKEEIFLDIACFIAGNIHGKGDVEKFLSFRGFDYENGIPALIEKSLITCEYGDIHMHRLLMDLGKSIVKEKSPKKPLKWSRLWDYKDFEKAMLDDQATENLEVIYIEKRLKLLHLKDVKFSGSLNHLSNELAYLNWREYPFKCLPKSFQPEKLVELHLFWSNIKQLWKGTKPLPNLKLLNLSFNKYLVEMPDVREALNLEKIYLEGCINLEKLNPSIGLLRNLAILNLRNCKNLVSLSNTILGLDSLEYLNVSGYEQRNTNHLKKLCLAEAHILSQSTSFFRNKMLLRPSNLLLPSIPTSPCFLICLRELDLSFCNLVRIPDIIGKLRCLEQLNLKRNNFTTLPNLHNLFRLYHLNLQHCKQFTRLPVLPLQTDCSLEIFKLPLSYYEDEDLVGLMIYNCPKLVEREHCTSFIFSWMIQIFQIRTLNSVVSKIPPVDLRGDLVIDQSYHLWLFHLSCQEFCAGHSNWRWDWSQIGSIERQNVKAYINKYGYRWVYEQDRQLSNSVDVKVHLTKAKGKHN* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0574 598 Gene3D - 1 78 IPR042197 -
Pvu10g0574 598 Gene3D Ribonuclease Inhibitor 177 358 IPR032675 -
Pvu10g0574 598 ProSiteProfiles Leucine-rich repeat profile. 408 429 IPR001611 GO:0005515
Pvu10g0574 598 PRINTS Disease resistance protein signature 29 43 - -
Pvu10g0574 598 PRINTS Disease resistance protein signature 297 313 - -
Pvu10g0574 598 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 449 - -
Pvu10g0574 598 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 449 IPR044974 GO:0006952
Pvu10g0574 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 88 IPR027417 -
Pvu10g0574 598 Gene3D Ribonuclease Inhibitor 360 468 IPR032675 -
Pvu10g0574 598 SUPERFAMILY L domain-like 201 482 - -
Pvu10g0574 598 SUPERFAMILY "Winged helix" DNA-binding domain 66 167 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0574 Pvu-Chr10 8867168 8869755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0574 18 424 WRKY Transcription Factor Family AT4G12020 31.333 1.66e-41 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0574 - - pvu:PHAVU_010G055400g 1214.52