Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0572 ATGGCTTCTAACGCCATCATCCAATACACCTCTTCTTCTTCGTCTCTTGCAACTCACATCTACGACGTATTTGTCAGCTTCCGCGGTGAAGACACGCGCAACACCTTCACTAGTTTTCTCTTTCAGGCTCTCCGTACAAAAGGCATCATTGTCTTCAAAGATGATGAAGATCTGAAAAAGGGTGAATCCATTGCACCCGAGCTGCTGCAAGCCATTCAAGCCTCTCGACTTTTCATTGTTGTCTTCTCACAGAACTATGCTTCCTCCACTTGGTGCTTGCGTGAACTGGCAGAGATACGTAACTGCATTGAAAGACGTGTTATTATACCTATATTTTATGATGTTGATCCTTCGGTGGTGCGCAAACAGGGTGGATGTTATGAGAAAGCATTTGCAGAACACGAAAAGAGATTCGGAGAAGATGAAGTGAAGATGGAGGAAGTTCAGAGATGGAGACAAGCTCTCACACAAGTCGCCAATCTCTCTGGTTGGGATATCCGAAATAAATCACAGTGTGAACCGATCGAAGAAATTGTTCAAAACATAATAAATATTGTGGGCCCCAAAATGTCAAAACTTCCGAAGGATGAACTGGTTGGGATAGAGTCTCGAGTTAGAGAATTAACAAATACTCTACGTTTGGATTCAATTAATGATGTTCGAGTTGTTGGGATTAGTGGGATGGGTGGCATAGGAAAGACAACTCTTGCTCGGGCTTTATATGAAAGAATTTATCATCAATATGATCGTCGTTGTTTTATTGATGATGTGAGCAAGATTTATCGAGATTCTGGTTTATTAGGTGTACAAAAGCAGTTAATTTCCCAGTCTCTAAATGTGAAAAATCTTGAAATTTGTAATGCTATTGATGGAACATATTGGGTGTGGACTAGGCTGCACAATGCAAGAACACTTCTAGTTCTTGACAATGTTGATCAAGGTGAACAACTTAAGATGTTCACAGCAAATAGAGATATTCGTGGATGTGTAGGTGAAGGGAGCAGAGTCGTCATAATTTCAAGAGATGAACATATATTGAAGACACATGGAGTGGATGATGTTTATCAAGTTCAGTTGTTGAGTTGGGAAAATGCTGTGCAGTTGTTTTGTAGAAATGCTTTCAAAGTTAATTATATATTGGATGATTATGAAGAGTTGGCACGTGAGGTACTTTCGCATGCTCAAGGTCATCCCTTAGCAATTGAAATAATTGGATCATCTTTGTTTGGTCGAAATGTCTCACAATGGAGAAGTGCATTGAGTAAGCTAAGATATAATAAAGATAGAAATATTATGGATGTTTTACGAATAAGTTTTGATCAATTGAAAGAAGAAGAAAAAGAAATATTTCTTGATATTGCATGCTTCCTCTACAAATGCGGTTATTCAAAGGATGAAGTGGAGAAATTTCTAAGATTTCGTGGATTTGATTATGAAAATGGCATACCAGCTCTGATTGAGAAATCTCTAATAACATGTGAAGATGGGGTTATTTATATGCATAGGTTGTTGATGGATTTGGGACAGAGTATTGTTAGAGAAAAATCACCTAAGGAGCCTCTAAAGTGGAGTAGGTTGTGGGATTACGAAGATTTCAAGAAAGCTATGTTAGACAATGAGGCTACTGAAAATCTTGAAGTCATATATATTAAACCTGGTTGGCATAGGGGGACTGTTAAGGCAGATGGTCTATCGAAAATTAGACACCTTAAGCTCCTTAAATTTATGAACGTGAGCTTTTCAGGAAGCCTCAATCATCTTTCGAATGAACTAGCATATCTTCAATGGAGTGGATATCCTTTTAAATGCTTGCCTCAAAGTTTTCAGCCAGAAAAACTAGTTGAGTTATACCTTGTTGGGAGCAGTATTAAACAACTATGGGAAGGAACAAAGCCATTGCAAAATTTGAAGTTTTTGGATCTCTCTTACTCCGAAGATTTAGTTGAGATGCCTGATGTTAGAGACGCCCTAAATCTTGAAAAGATAGAACTTAAAGGATGCATAAAGCTCCGAAAAATCAATCCATCGATCGGTCTTTTGAAAAAGCTTGCTTTTTTGAATTTGGGAAATTGCAAAAACCTAGTAAGCTTACCCCATACCATATTGGACTTGAATTCTCTTGAATATCTGAATGTCTCTGGCTGTTCAAAATTGTATAATAATGAGTTATTAGATGAACGAAGGAACAAGGATCATTTGAAAAAGCTTTGTTTAGTTGAAGCTCATATTCTTTCCCAATCAACACCCTCTTTCATAAAAAAAATGTTCTTGCAACCTTCAGATTTGTTGTTTCCCTCCTCTCCTACTCTTCCTTGTTCTCTCACTTGTTTGCGTGAACTCGATCTAAGCTTCTGTAAATTAGTTCGAATCCCTGATGTCATTGGAAAGTTAAGTTGCCTAGAAAGGCTAAATTTGAAGGGAAACAATTTTACTACACTTCCTAACCTCCAGAACCTTTTCAGATTATATCATTTAAACTTACAACATTGCAAAAAATTCAAACGATTGCCTGTTCTCCCTTTGCAAACCGACTACTCCTCAGAATTTTGCAAGCTTCCACTCTCATGTTTCACAGATGAAAAACTGGTAGGATTAATCATTTACAACTGCCCAAAATTAGTTGAGAGGGAACTTTGTACTAGCTTGATTTTTTCGTGGATGATACAAATTGTTCAGTCTTACGAGGCAAGGTTCTTAGAAAATGCGCTTAGTAGTCAAATCAAACCATGTGTTGGAAGTCTTATCCCGGGAAGTGAAATACCGAGGTGGTTCAACAATCAGTTTGTGAGCATGGATAATTCAATAAAGATTGATACCTCTCTTGTTATGCATGAAAATAATTGGATTGGTGTTGTGTGTTGTGCAATATTCCATGTGGGCAATGAAAGCGAGATCATTGATTATACAAGCATAGATCATAGTGCTAGAATTCCTCCAGTCGATTTGAGAACAGATCAAGTCATTGACCATTCAGATCATATGTGGCTATTTTATTTGTCTCGTCAAGAGTTTGGTGGAGGACATTATGATTTCAGATGGTACAAATCTTATAATGGTGTTATAAGTGTGGAATTTAGAAGACTGGTGATGGAATGGAGTGAATTCCGGAAGGACAAAGACCGATATGTTAATGTGTATGTGAAGAAATATGGGTATCGCAGGGTATATGAGAAAGATCGACAACTACCAAACTCAGGAACAAGGGTGGACATCACACAGTTCTTTGGAACATCTTCACATGAGTACTCCTCTAAGGCATCTAGCCAAGAAACTATTTTGCAATTGATGCAGTAG 3294 0.378 MASNAIIQYTSSSSSLATHIYDVFVSFRGEDTRNTFTSFLFQALRTKGIIVFKDDEDLKKGESIAPELLQAIQASRLFIVVFSQNYASSTWCLRELAEIRNCIERRVIIPIFYDVDPSVVRKQGGCYEKAFAEHEKRFGEDEVKMEEVQRWRQALTQVANLSGWDIRNKSQCEPIEEIVQNIINIVGPKMSKLPKDELVGIESRVRELTNTLRLDSINDVRVVGISGMGGIGKTTLARALYERIYHQYDRRCFIDDVSKIYRDSGLLGVQKQLISQSLNVKNLEICNAIDGTYWVWTRLHNARTLLVLDNVDQGEQLKMFTANRDIRGCVGEGSRVVIISRDEHILKTHGVDDVYQVQLLSWENAVQLFCRNAFKVNYILDDYEELAREVLSHAQGHPLAIEIIGSSLFGRNVSQWRSALSKLRYNKDRNIMDVLRISFDQLKEEEKEIFLDIACFLYKCGYSKDEVEKFLRFRGFDYENGIPALIEKSLITCEDGVIYMHRLLMDLGQSIVREKSPKEPLKWSRLWDYEDFKKAMLDNEATENLEVIYIKPGWHRGTVKADGLSKIRHLKLLKFMNVSFSGSLNHLSNELAYLQWSGYPFKCLPQSFQPEKLVELYLVGSSIKQLWEGTKPLQNLKFLDLSYSEDLVEMPDVRDALNLEKIELKGCIKLRKINPSIGLLKKLAFLNLGNCKNLVSLPHTILDLNSLEYLNVSGCSKLYNNELLDERRNKDHLKKLCLVEAHILSQSTPSFIKKMFLQPSDLLFPSSPTLPCSLTCLRELDLSFCKLVRIPDVIGKLSCLERLNLKGNNFTTLPNLQNLFRLYHLNLQHCKKFKRLPVLPLQTDYSSEFCKLPLSCFTDEKLVGLIIYNCPKLVERELCTSLIFSWMIQIVQSYEARFLENALSSQIKPCVGSLIPGSEIPRWFNNQFVSMDNSIKIDTSLVMHENNWIGVVCCAIFHVGNESEIIDYTSIDHSARIPPVDLRTDQVIDHSDHMWLFYLSRQEFGGGHYDFRWYKSYNGVISVEFRRLVMEWSEFRKDKDRYVNVYVKKYGYRRVYEKDRQLPNSGTRVDITQFFGTSSHEYSSKASSQETILQLMQ* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0572 1097 Gene3D Ribonuclease Inhibitor 736 948 IPR032675 -
Pvu10g0572 1097 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1015 IPR044974 GO:0006952
Pvu10g0572 1097 Gene3D - 18 188 IPR035897 -
Pvu10g0572 1097 Pfam NB-ARC domain 203 426 IPR002182 GO:0043531
Pvu10g0572 1097 Gene3D - 360 443 IPR042197 -
Pvu10g0572 1097 Gene3D Ribonuclease Inhibitor 560 735 IPR032675 -
Pvu10g0572 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 453 IPR027417 -
Pvu10g0572 1097 Gene3D - 189 355 IPR027417 -
Pvu10g0572 1097 Pfam TIR domain 21 192 IPR000157 GO:0007165
Pvu10g0572 1097 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 164 IPR035897 -
Pvu10g0572 1097 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Pvu10g0572 1097 SMART till_3 20 161 IPR000157 GO:0007165
Pvu10g0572 1097 PRINTS Disease resistance protein signature 222 237 - -
Pvu10g0572 1097 PRINTS Disease resistance protein signature 298 312 - -
Pvu10g0572 1097 PRINTS Disease resistance protein signature 394 408 - -
Pvu10g0572 1097 PRINTS Disease resistance protein signature 631 647 - -
Pvu10g0572 1097 SUPERFAMILY L domain-like 500 857 - -
Pvu10g0572 1097 Pfam C-JID domain 915 1060 IPR045344 -
Pvu10g0572 1097 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1015 - -
Pvu10g0572 1097 ProSiteProfiles Leucine-rich repeat profile. 799 820 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0572 Pvu-Chr10 8782595 8788498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0572 21 815 WRKY Transcription Factor Family AT4G12020 30.037 4.85e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0572 - - pvu:PHAVU_010G055100g 1322.76