Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0571 ATGCCTTCTAACGCCATCATCCAATACACCTCTTCTTCTTCATCTCCTGCAACTTACATCTACGACGTCTTTGTCAGCTTTCGCGGTGAAGACACGCGCAACACCTTCACTAGTTTTCTCTTTCAGGCTCTCCGTACAAAAGGCATCAATGTTGTTATTATACCTATATTTTATGATGTTGAACCTTCGGTGGTGCGCAAACAGAGTGGATGTTATGAGAAAGCATTTACAGAATACGAAAAGAGATTGAGAGAAGATGAAGTGAAGATGGAGGAAGTTCAGAGATGGAGACAAGCTCTCACACAAGTCGCCAATATCTCTGGTTGGGATATCCGAAATAAGTCACAGTGTGAACAAATCAAAGAAATTGTTCAAAAGATAATAAAAATTTTGGGCCCAAAAATGTCAAGACTTCCAAAGGATGAATTGATTGCGATAGAGTCTCGGGTTGAAGAATTAAAAAATCTTCTATGTTTAGAGCCGGTTAATGATGTTCGAGTTGTTGGAATTAGTGGGATGCATGGCATAGGAAAGACAACTCTTGCTCGGGCATTATATGAAAGAATCTATCATCAATATGATTTTGGTTGTTTTATTGATGATGTAAGCAATATTTATCGAGATTCTGGTTCATTAGGTGTACAAAAGCAGCTAATTTCTCAGTCTCTAAATGAGAAAAGTCTTGAACTTTGTAATGTTATTGATGGAACATATTGGGTGTGGACTAAGTTGCATAATGCAAGAACACTTATAGTTCTTGACAATGTTGATCAAGGTGAACAACTTAAGCTGCTTACAGGAAACAGAGATATACGTACATGCATTAGTGGAGGGAGTAGAATCATTATAATTTCAAGGGATGAACATATATTGAAGACACATGAAGTGAATTATGTTTATCAAGTCCATCCGTTGAGTTGGAAAAATGTTGTGCAGTTGTTTTGTAGAAATGCTTTCAAAGTTAATTATATATTGGACGATTATGAAGAGTTAGCAAGCGAGGTACTTTTTCATGCTCAAGGTCATCCCTTGGCAATTGAAGTAATTGGGTCATCTTTGTCTGGTCGAAATGTCTCACAATGGAAAATTGCATTGGGTAGGCTAAAATATAACAAAGATAGAAATATTATGGATGTTTTACGTATAAGTTTTAATCAGTTGGAAGAAGAAGAAAAAGAAATATTTCTTGATATTCCATGTTTCCTCAACAGTGATCATGAGGGTATGGGTTATTCAAAGGATGAAGCGGAGAAAATTTTGAGCTTCCGTGGATTTGATTACAAAAATGGCATACCAACTCTGATTGAGAAATTTCTAATAACGTGTGAATATGGGTATATTCATATGCATAGGTTGTTGATGGATTTGGGACAGAGTATTGTTAGAGAAAAATCACCTAAGGAACCTCTAAAGTGGAGTAGGTTGTGGGAGTACGAAGATTTTGAGAAATCTATGTTAGACAACGAGGCAACTGAAAATCTTGAAGTCATATATATTGAATGCAATTTGCTTTCGGGGACTGTGAGGGCAGATGGAAGTCTCAATCATCTTTCGAATGAACTAGCATATCTTAATTGGAGAAAATATCCTTTTAAATGTTTGCCTCAAAGTTTTCAGCCGGAAAAACTAGTTGAATTACGCCTTGTTCGGAGCAGTATTAAACGACTATGGAAAGGCACAAAGTCATTGAACAATTTGAGGTTTGTGAATCTCTCTTACTCTGAAGATTTAGTTGAGATGCCAGATGTTAGAGAAACTCTAAATCTTGAAAAGATAGAACTTGAAAAATGCATAAAGCTCAGAAAAGTCCATCCATCGATCGGTCTTTTGAGAAAGCTTGCTTTTTTGAATTTGAGAATTTGCAAAAACCTCATGAGCTTACCCAATATCATATTGAGCTTGAATTCTCTTGAATATCTGAATGTGTCTGGATTTTTGTTGTTGCCCTCCATTCCTACTTGCCCTTGTTCACTCACTTGTTTGCTTGAACTCGATCTAAGCTTTTGTAACTTAGTTCGAATCCCTGATGCCATTGGGAAGTTAAGGTGCCTTGAACGACTAAATTTGAAGGGAAACAATTTTACTACACTTCCCAACCTCCAGAACCTTTTCAGACTGTATCATTTAAACTTACAACATTGCAAGCCATTCAAACGCTTGCCTGTTCTCCCTTCGCAAACCGACTTACCTTCAACTTTACAATTAGGATTACTAATTTACGATTGTCCAGAATTAGTTGTGAGTGAAGACTGTAGTAGCAGGATTTTTTCGTGGGTGATACAAATTTTTCAGGCGAGGTGCTCAAGAAACACGGATAGTCCTAATTTATGTCCAAGTGCCGGAAGTGTTATCCCGGGAAGTGAAATACCGAGGTGGTTCAACAATCAGTTTGTGAGCATGGACAATTCAATAAGGATTGATGCCTCACCTATTATGCATGTCAATAATTGGATTGGTGTTGACATCACTGGTAATGGATCCATAAAAGATAATCCTAGAATTCCTCCAGTCGATTTGAGAAGAGATCTAGTCATTGCCAAGTCAGATCATATGTGGCTATTTTATTTGTCTCTCCAAGAGTTTCATAGACTATGTTATAATTGCAGATGGTACACAACTTATAAAGGTGTTACTACAGTGAAATTTTCAAAACTGATGGCGAACTGGACTAAAATTTGGAAGAAAGAAAACCAATATGTTAAGGTATATCTGAATAAATATGGGTATCGTTGGGTATATGAGCAAGATCGAAAACTACCAAACTCAGGTACTTAA 2775 0.3683 MPSNAIIQYTSSSSSPATYIYDVFVSFRGEDTRNTFTSFLFQALRTKGINVVIIPIFYDVEPSVVRKQSGCYEKAFTEYEKRLREDEVKMEEVQRWRQALTQVANISGWDIRNKSQCEQIKEIVQKIIKILGPKMSRLPKDELIAIESRVEELKNLLCLEPVNDVRVVGISGMHGIGKTTLARALYERIYHQYDFGCFIDDVSNIYRDSGSLGVQKQLISQSLNEKSLELCNVIDGTYWVWTKLHNARTLIVLDNVDQGEQLKLLTGNRDIRTCISGGSRIIIISRDEHILKTHEVNYVYQVHPLSWKNVVQLFCRNAFKVNYILDDYEELASEVLFHAQGHPLAIEVIGSSLSGRNVSQWKIALGRLKYNKDRNIMDVLRISFNQLEEEEKEIFLDIPCFLNSDHEGMGYSKDEAEKILSFRGFDYKNGIPTLIEKFLITCEYGYIHMHRLLMDLGQSIVREKSPKEPLKWSRLWEYEDFEKSMLDNEATENLEVIYIECNLLSGTVRADGSLNHLSNELAYLNWRKYPFKCLPQSFQPEKLVELRLVRSSIKRLWKGTKSLNNLRFVNLSYSEDLVEMPDVRETLNLEKIELEKCIKLRKVHPSIGLLRKLAFLNLRICKNLMSLPNIILSLNSLEYLNVSGFLLLPSIPTCPCSLTCLLELDLSFCNLVRIPDAIGKLRCLERLNLKGNNFTTLPNLQNLFRLYHLNLQHCKPFKRLPVLPSQTDLPSTLQLGLLIYDCPELVVSEDCSSRIFSWVIQIFQARCSRNTDSPNLCPSAGSVIPGSEIPRWFNNQFVSMDNSIRIDASPIMHVNNWIGVDITGNGSIKDNPRIPPVDLRRDLVIAKSDHMWLFYLSLQEFHRLCYNCRWYTTYKGVTTVKFSKLMANWTKIWKKENQYVKVYLNKYGYRWVYEQDRKLPNSGT* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0571 924 ProSiteProfiles TIR domain profile. 19 131 IPR000157 GO:0007165
Pvu10g0571 924 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 109 IPR035897 -
Pvu10g0571 924 PRINTS Disease resistance protein signature 167 182 - -
Pvu10g0571 924 PRINTS Disease resistance protein signature 243 257 - -
Pvu10g0571 924 PRINTS Disease resistance protein signature 339 353 - -
Pvu10g0571 924 PRINTS Disease resistance protein signature 561 577 - -
Pvu10g0571 924 Gene3D - 305 388 IPR042197 -
Pvu10g0571 924 Pfam NB-ARC domain 147 369 IPR002182 GO:0043531
Pvu10g0571 924 SUPERFAMILY L domain-like 492 735 - -
Pvu10g0571 924 Pfam TIR domain 51 132 IPR000157 GO:0007165
Pvu10g0571 924 Gene3D Ribonuclease Inhibitor 470 741 IPR032675 -
Pvu10g0571 924 ProSiteProfiles Leucine-rich repeat profile. 683 704 IPR001611 GO:0005515
Pvu10g0571 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 398 IPR027417 -
Pvu10g0571 924 Gene3D - 52 104 IPR035897 -
Pvu10g0571 924 Gene3D - 2 51 IPR035897 -
Pvu10g0571 924 Gene3D - 113 299 IPR027417 -
Pvu10g0571 924 SUPERFAMILY "Winged helix" DNA-binding domain 375 481 IPR036390 -
Pvu10g0571 924 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 138 646 IPR044974 GO:0006952
Pvu10g0571 924 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 647 916 IPR044974 GO:0006952
Pvu10g0571 924 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 138 646 - -
Pvu10g0571 924 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 647 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0571 Pvu-Chr10 8692617 8696318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0571 52 721 WRKY Transcription Factor Family AT4G12020 29.958 2.18e-72 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0571 - - pvu:PHAVU_010G055100g 1844.32