Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0567 ATGCAAAAACAAAAACTAGTTGTCCCAATTGCAGCAAAAACATTGTTCACAGGGAACAGAGATATACGTAGATGTGTAGGTGGAGGGAGCAGAATCATCATAATCTCAAGGGATGAACATATATTGAAGACACATAAAGTGGATGATGTTTATCAAGTCCAACCGTTGAGGGAAAAAAATGCTATGCAGTTGTTTTGTAAAAATGCTTTCAAAGTTAATTATATATTGGGTGATTATGTAAACTTGGCATGTGACGTACTTTTTCATGCTCAAGGCCATCCCTTGGCAATTGAAGTAATTGGGTCATCTTTGTTTGGTCGAAATGTCTCACAATGGAGAAGTGCATTGGATAGGCTAAGACATAACAAGGATAGAAATATTGTGGATGTTTTACGTATAAGTTTTGATCACCTAGAAGAAGACAAAAAAGAAATATTTTTAGATATTGCATGCTTCATTGCTGATAATATTCATGGTAAGGGTGATGTGGAGAAATTCTTAAGCTTTCATGGATTTGATTACGCAAATGGCATACTAGCTGTAATTGAGAAATCTCTAATAACATGTGAATATGGGGATATTTGTATGCATAGGTTGTTGATGGATTTGGGGAAGAGTGTTGCAACTGAAAATCTTGAAGTCATATATATTGAAAAACACCTTAACTTGCTTCATCTTAGGGATGTGAAATTTTCAAGAAGTCTCAATCATCTTTTGAATGAACTAGCATATTTTAATTGGAGGGAATATTCTTTTAAATGTTTGCCTCAAAGTTTTCAACCAGAAAAACTAGTCGAGTTACACCTTTTTGGGAGCAGTATCAAACAACTATGGAAAGGCATAAAGCCATTGCACAATTTAAAGCTTTTGAATCTCTCTTTCAACAAATATCTAGTTGAGATGTCGGATGTTAGAGAGGCCCTAAATCTTGAAAGGATATATCTTGAAGGATGCATAAAGCTCGAAAAACTAAATCCATTGATCGGTCTTTTGAGAAGTCTTGCTATTTTGAATTTGAGAAACTGCAAAAACCTAGTAAGCTTATCCAATACCATATTGGGGCTGTATTCTCTTGAATATTTGAATGTCTCTGGATGTTCAAAACTGTATAATAATGAGTTATTAGATGAACAAAGGAACACAAGGCATTTGAAGAAGCTTTGTTTAGCAGAAGCTCCTATTCTTTCCCAGTCAACATCCTTTTTCATAAACAAAATGTTGTTGCGGCCTTCAAATTTGTTGTTGCCTTCCATTCCTACTTTCCCTTGTTTGCTCACTTGTTTGCGTGAACTCGATCTAAGCTTCTGTAACTTAATTCGAATCCCTGATGCCATTGGGAAGTTAAGGTGCCTTGAACGGCTAAATTTGAAGGGAAACAATTTTACTAAACTTCCTAACCTGCATAACCTTGTCAGATTGTATCATTTAAACTTACAACATTGCAAACAATTCACACACTTGCCCGTTCTCCCTTTGCAAACCGAATGTTCCTCAGAAATTTTCAAGCTTCCACTATCATATTACAAAGATGAAGATCTGGTAGGATTAATGATTTACAACTGCCCAAAATTAGTTGAGAGGGAACACTGTACTAGCTTTATTTTTTCGTGGATGATTCAAATTTTTCAGTCTTTTGAGGCGAGGTGCTTCGAAAATAGGCAATTTAATTTCAGGACTCCATGTGTTGGAAGTGTTATCCCAGGAAGTGAAATACCGAGGTGGTTCAACAATCAGTTTGTGGTGAGCATGGACAATTCAATAAGGATTGATGTCTCTCCTCTTATGCATGATAATAATTGTATTGGTGTTATCTGTTGTGCAATATTCCATATTGACTTTGGTGGGAGTTATGATAAAGTTATATATCATAAAGCTAAAATTCCTCCAGTCGATTTGAGAGGAGATCTAGTCATTGACCAGTCATATCATTTGTGGCTATTTTATTTGTCTCGTCAAGAGTTTTTTGCAGAACATTGTAATTGGAGATGGTACTCATTTCATAATGGTGTTATTGGTATGGAATTTAGGGAATTGATCAGGGACTGGAGCCAAATCGGCTCGATAGAAAAGCAATATGTTAAGGCCTATATAAATAAATATGGGTATCGGTGGGTATATGAGAAAGATCAACAACTACCAAACACA 2145 0.3562 MQKQKLVVPIAAKTLFTGNRDIRRCVGGGSRIIIISRDEHILKTHKVDDVYQVQPLREKNAMQLFCKNAFKVNYILGDYVNLACDVLFHAQGHPLAIEVIGSSLFGRNVSQWRSALDRLRHNKDRNIVDVLRISFDHLEEDKKEIFLDIACFIADNIHGKGDVEKFLSFHGFDYANGILAVIEKSLITCEYGDICMHRLLMDLGKSVATENLEVIYIEKHLNLLHLRDVKFSRSLNHLLNELAYFNWREYSFKCLPQSFQPEKLVELHLFGSSIKQLWKGIKPLHNLKLLNLSFNKYLVEMSDVREALNLERIYLEGCIKLEKLNPLIGLLRSLAILNLRNCKNLVSLSNTILGLYSLEYLNVSGCSKLYNNELLDEQRNTRHLKKLCLAEAPILSQSTSFFINKMLLRPSNLLLPSIPTFPCLLTCLRELDLSFCNLIRIPDAIGKLRCLERLNLKGNNFTKLPNLHNLVRLYHLNLQHCKQFTHLPVLPLQTECSSEIFKLPLSYYKDEDLVGLMIYNCPKLVEREHCTSFIFSWMIQIFQSFEARCFENRQFNFRTPCVGSVIPGSEIPRWFNNQFVVSMDNSIRIDVSPLMHDNNCIGVICCAIFHIDFGGSYDKVIYHKAKIPPVDLRGDLVIDQSYHLWLFYLSRQEFFAEHCNWRWYSFHNGVIGMEFRELIRDWSQIGSIEKQYVKAYINKYGYRWVYEKDQQLPNT 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0567 715 Gene3D Ribonuclease Inhibitor 209 393 IPR032675 -
Pvu10g0567 715 Gene3D - 55 139 IPR042197 -
Pvu10g0567 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 149 IPR027417 -
Pvu10g0567 715 Pfam C-JID domain 566 710 IPR045344 -
Pvu10g0567 715 Gene3D Ribonuclease Inhibitor 404 507 IPR032675 -
Pvu10g0567 715 PRINTS Disease resistance protein signature 90 104 - -
Pvu10g0567 715 PRINTS Disease resistance protein signature 329 345 - -
Pvu10g0567 715 ProSiteProfiles Leucine-rich repeat profile. 450 471 IPR001611 GO:0005515
Pvu10g0567 715 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 207 IPR044974 GO:0006952
Pvu10g0567 715 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 219 709 IPR044974 GO:0006952
Pvu10g0567 715 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 26 207 - -
Pvu10g0567 715 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 219 709 - -
Pvu10g0567 715 SUPERFAMILY L domain-like 196 525 - -
Pvu10g0567 715 Pfam NB-ARC domain 29 123 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0567 Pvu-Chr10 8636338 8640216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0567 27 491 WRKY Transcription Factor Family AT5G45050 28.972 3.92e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0567 - - pvu:PHAVU_010G054700g 1460.28