Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0559 ATGTTTGGACGTGGTGGACCAAGGAAGAGTGATAATTCTAAATATTATGATATTCTTGGAGTTTCAAAGAATGCCACTGAAGATGAAATCAAGAAGGCCTACAGAAAGGCTGCTATGAAGAACCATCCTGACAAGGGCGGAGATCCTGAGAAGTTTAAGGAATTAGGCCAAGCATATGAAGTTTTAGGTGATCCTGAGAAGAAAGAAATGTATGATCAGTACGGTGAAGATGCCCTTAAGGATGGGATGGGAGGAGGAGGAAGCTCGTTTCATAATCCATTTGATATATTTGAGTCATTTTTTGGAGGATCAAGTTTTGGTGGTGGTGGTAGTTCTCGAGGTAGAAGACAAAAACAAGGTGAAGATGTGGTGCACTCTTTGAAGGTGTCCTTGGAGGATGTCTATAATGGTGCAAATAAGAAACTATCTCTTTCTAGAAACGTATTATGCCCAAAATGTAAAGGGAAAGGGTCAAAAAGTGGAGCAGCTAGTAGGTGTTTTGGTTGCCAAGGCACTGGTATGAAGGTCACAAGAAGGCAGATAGGACTAGGCATGATTCAACAAATGCAACATGTCTGCTCGGACTGCAGAGGATCTGGTGAGGTTATTAACGAGAGAGATAAATGTCCTCAGTGCAAAGGAAACAAGGTTACTCATGAAAAGAAGGTGCTGGAGGTGCATGTTGAAAAGGGGATGCAGCAGGGTCAGAAGATTATTTTTGAAGGACAAGCTGATGAAGCTCCTGACGCATTGACAGGGGACATTGTTTTAGTATTGCAAGTGAAGGAGCACCCAAAGTTCAGGAGGGAGCAAGACGATCTCTTCATTGATCACAATCTCAGCTTACGAGAGGCACTCTGTGGCTTCCAGATTGCTGTCACACATCTTGATGGTAGGCAATTACTGATCAAATCAAACCCTGGGGAAGTCATCAAGCCAGGTCAATATAAAGCAATAAATGATGAGGGAATGCCACAACACAACAGGCCATTCATGAAGGGTCGTCTCTACATCCAGTTTAATGTTGATTTCCCAGACACAGGGTTTATTTCCCCTGATCAATGCCAGTTATTGGAGAAGGTATTACCTCAGAAGGGCAGCAAGAACATGTCAGCTGCGGAGCTGGATGACTGTGAAGAGACCACTTTGCATGATGTCAACTTGAAGGAGGAGATGAGACGAAAGCATCAACACCATTACCGCGAGGCATATGATGAAGATGAAGATGATGGTCCTTCTGGTGGTCACCGAGTGCAATGTGCTCAACAGTAG 1272 0.4379 MFGRGGPRKSDNSKYYDILGVSKNATEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLGDPEKKEMYDQYGEDALKDGMGGGGSSFHNPFDIFESFFGGSSFGGGGSSRGRRQKQGEDVVHSLKVSLEDVYNGANKKLSLSRNVLCPKCKGKGSKSGAASRCFGCQGTGMKVTRRQIGLGMIQQMQHVCSDCRGSGEVINERDKCPQCKGNKVTHEKKVLEVHVEKGMQQGQKIIFEGQADEAPDALTGDIVLVLQVKEHPKFRREQDDLFIDHNLSLREALCGFQIAVTHLDGRQLLIKSNPGEVIKPGQYKAINDEGMPQHNRPFMKGRLYIQFNVDFPDTGFISPDQCQLLEKVLPQKGSKNMSAAELDDCEETTLHDVNLKEEMRRKHQHHYREAYDEDEDDGPSGGHRVQCAQQ* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0559 423 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 423 IPR044713 GO:0006457|GO:0030544
Pvu10g0559 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 347 IPR008971 GO:0006457|GO:0051082
Pvu10g0559 423 Pfam DnaJ domain 14 72 IPR001623 -
Pvu10g0559 423 Gene3D - 265 346 - -
Pvu10g0559 423 Gene3D DnaJ domain 11 111 IPR036869 -
Pvu10g0559 423 MobiDBLite consensus disorder prediction 391 423 - -
Pvu10g0559 423 Gene3D - 150 216 - -
Pvu10g0559 423 PANTHER CHAPERONE PROTEIN DNAJ A6 8 423 - -
Pvu10g0559 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 116 275 IPR008971 GO:0006457|GO:0051082
Pvu10g0559 423 CDD DnaJ_C 121 346 - -
Pvu10g0559 423 Hamap Chaperone protein DnaJ [dnaJ]. 11 391 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pvu10g0559 423 MobiDBLite consensus disorder prediction 391 414 - -
Pvu10g0559 423 PRINTS DnaJ domain signature 16 34 IPR001623 -
Pvu10g0559 423 PRINTS DnaJ domain signature 47 67 IPR001623 -
Pvu10g0559 423 PRINTS DnaJ domain signature 67 86 IPR001623 -
Pvu10g0559 423 SMART dnaj_3 13 67 IPR001623 -
Pvu10g0559 423 Gene3D - 112 264 - -
Pvu10g0559 423 Pfam DnaJ C terminal domain 124 345 IPR002939 -
Pvu10g0559 423 ProSiteProfiles dnaJ domain profile. 14 75 IPR001623 -
Pvu10g0559 423 CDD DnaJ_zf 150 216 IPR001305 GO:0031072|GO:0051082
Pvu10g0559 423 Pfam DnaJ central domain 150 216 IPR001305 GO:0031072|GO:0051082
Pvu10g0559 423 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Pvu10g0559 423 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 218 IPR036410 -
Pvu10g0559 423 SUPERFAMILY Chaperone J-domain 11 110 IPR036869 -
Pvu10g0559 423 CDD DnaJ 15 64 IPR001623 -
Pvu10g0559 423 ProSiteProfiles Zinc finger CR-type profile. 137 221 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0559 Pvu-Chr10 8473049 8477136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0559 15 74 C2H2 Transcription Factor Family AT1G74250 42.029 5.73e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0559 K09503 - gmx:100812236 742.265