Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu10g0540 | ATGTTGTCGTCTTTTCGTTTGAACTTCCCTTGTGCTGTACAAGGAACTATATTTTCTCAAAGGAAGCAATTAACTCATGGATGCACAAACCAAAATTCAAAGGATTATTACCTAGTGCAGGATAGTTGCATGTTGCATTCTGAAAAGCCATTGAGGAGAACACTCTTCCTTTCTGTCTTGGTCTCAACTGGTTTTTTTCCAACTTTGTCTTCTTATGGGAAGACAAAGGGTAAGAATCCTTACGACGAAAATCGGTTGCTACAACAAAATCGGCGGATACAGAAAGAAAACAATGCGCCAGAGGAATTCCCAAATTTTATTAGAGAAGGTTTCCAAGTTAAAATAGTATCTTCAGAGAACTATGTAAAGAGTGACTCAGGGCTCATATACCGGGATTTTGTAGTTGGTGAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTATGTTGGTTATAATGAATCTGGTCGTCGAATCGACAGCTCTTACATGCAGGGTACTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCGCAAAACAGTTTGAAGTTTTTGATGTTGAGCTATTAAGCGTACAGAACTGTGAAAGGAGGACGGTAGCCTTTTACTCAGATGTCATTTGCAATTGA | 744 | 0.414 | MLSSFRLNFPCAVQGTIFSQRKQLTHGCTNQNSKDYYLVQDSCMLHSEKPLRRTLFLSVLVSTGFFPTLSSYGKTKGKNPYDENRLLQQNRRIQKENNAPEEFPNFIREGFQVKIVSSENYVKSDSGLIYRDFVVGEGDCPKDGQQVTFHYVGYNESGRRIDSSYMQGTPAKIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQNCERRTVAFYSDVICN* | 248 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu10g0540 | 247 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 141 | 227 | IPR001179 | GO:0003755 | |
Pvu10g0540 | 247 | Gene3D | - | 89 | 239 | IPR046357 | GO:0003755 | |
Pvu10g0540 | 247 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC | 7 | 247 | IPR044239 | - | |
Pvu10g0540 | 247 | SUPERFAMILY | FKBP-like | 88 | 231 | - | - | |
Pvu10g0540 | 247 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 144 | 231 | IPR001179 | GO:0003755 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu10g0540 | 139 | 233 | Calmodulin-binding Proteins | AT5G48570 | 32.353 | 2.03e-10 | 58.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu10g0540 | - | - | gmx:100305486 | 462.225 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pvu10g0540 | 10 | 8242300 | 8246826 | Pvu10g0540 | 10 | 8242300 | 8246826 | ECH |