Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0540 ATGTTGTCGTCTTTTCGTTTGAACTTCCCTTGTGCTGTACAAGGAACTATATTTTCTCAAAGGAAGCAATTAACTCATGGATGCACAAACCAAAATTCAAAGGATTATTACCTAGTGCAGGATAGTTGCATGTTGCATTCTGAAAAGCCATTGAGGAGAACACTCTTCCTTTCTGTCTTGGTCTCAACTGGTTTTTTTCCAACTTTGTCTTCTTATGGGAAGACAAAGGGTAAGAATCCTTACGACGAAAATCGGTTGCTACAACAAAATCGGCGGATACAGAAAGAAAACAATGCGCCAGAGGAATTCCCAAATTTTATTAGAGAAGGTTTCCAAGTTAAAATAGTATCTTCAGAGAACTATGTAAAGAGTGACTCAGGGCTCATATACCGGGATTTTGTAGTTGGTGAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTATGTTGGTTATAATGAATCTGGTCGTCGAATCGACAGCTCTTACATGCAGGGTACTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCGCAAAACAGTTTGAAGTTTTTGATGTTGAGCTATTAAGCGTACAGAACTGTGAAAGGAGGACGGTAGCCTTTTACTCAGATGTCATTTGCAATTGA 744 0.414 MLSSFRLNFPCAVQGTIFSQRKQLTHGCTNQNSKDYYLVQDSCMLHSEKPLRRTLFLSVLVSTGFFPTLSSYGKTKGKNPYDENRLLQQNRRIQKENNAPEEFPNFIREGFQVKIVSSENYVKSDSGLIYRDFVVGEGDCPKDGQQVTFHYVGYNESGRRIDSSYMQGTPAKIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQNCERRTVAFYSDVICN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0540 247 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 141 227 IPR001179 GO:0003755
Pvu10g0540 247 Gene3D - 89 239 IPR046357 GO:0003755
Pvu10g0540 247 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 7 247 IPR044239 -
Pvu10g0540 247 SUPERFAMILY FKBP-like 88 231 - -
Pvu10g0540 247 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 144 231 IPR001179 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0540 139 233 Calmodulin-binding Proteins AT5G48570 32.353 2.03e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0540 - - gmx:100305486 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0540 10 8242300 8246826 Pvu10g0540 10 8242300 8246826 ECH