Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0456 ATGCAAAAGCAAAGGATTTTGATGGAGATTAAGACAGTGGAAATTTTGTTGGGAGTAGCTTTGGTGACGTTGATTCATGGCTTGAATGTTTTGGTGTTGAGGCCAAGATCAATGAGAGAAAAGCTTAAGAGGCAGGGGATTAAAGGGCCTTCCCCTCACTTCTACTTTGGCAACATCCCAGAAATGAAGAACATTATGCTTCAAGTTCAGTCAGAATCAGCCACCAAAGTTAAAGAGGAAGATGAAGAGGTTTCTGTTTCTCACAAGTGGCCTTTCACTATCTTCCCTCATATTCAAAAGTGGATCAACCAATATGGTCCCATATACTTGTTTTCTTCTGGGTCTATACAGTGGCTAATGGTGTCAGATATAGGGATGGTGAAGGAGGTCATCATGCACACCTCTTTGAGTCTAGGGAAGCCTACTTATCTGTCTAAAGATCTGGGGCCACTCTTGGGCAAAGGCATAGTGACATCAAGTGGGCCAACTTGGTCTCATCAAAGGAAGATAATGGCCCCTGAACTATACCTTGATAAGGTGAAGGCAATGGTTAATCTGATGGTGGACTCAACATATACAACACTAAGGTCTTGGGAGGCTAGAGTTGAAAGTGAGGGAGCAGTATCAGAGATTAAAATTGACGAAGATCTTCGAAGTTTGTCAGCTGACATAATTGCCAGAGCTTGTTTTGGAAGCAATTACATTGAAGGAAAAGAAATATTCTCAAAGCTTAGAGATCTTCAAATTCTCTTGTCCAAGCTTCATGTTGGAATTCCAGGCTTTCGATACTTGCCAAACAAAAGCAACAGACAAATGTGGAGATTGGAGAAAGAGATAGACTCAAAGATATCAAAGCTCATAAAACAACGCCTGGTGGAAACTCATGAGCAGGATCTTTTACAAATGATACTTAAGGGTGCAAAGAACTCTGAGGGTGGTGATGGACTCATATCAGATTCCATCTCATGTGACAGGTTTATGATAGATAACTGCAAAAATATATTCTTTGCTGGACATGAGACTACTGCCATCACAGCATCATGGTGCTTAATGCTGTTATCTGTGCATCAAGATTGGCAAGACCGTGTCCGAGCTGAGGTGCTTGAAGTTTGTGGAAAAGGTGCTCCAGATGCAGACATGCTTAGAAGCTTGAAAACATTAACCATGGTGATTCAAGAGACTTTGAGGTTGTATCCACCAGCAACATTTGTTGTTAGAGCAGCTCTCCAAGATGTCAATCTAAAAGGGTTCCTAATTCCAAAAGGAATGAACATTCAGATTCCAGTCTCAGTGCTGCAGCATGACCCTGGTCTCTGGGGTCCTGATGCTCACAAGTTCAATCCAGAAAGATTTGCAAATGGGGTGCTTGGAGCATGCAAGGTTCCACAGGCTTATATGCCATTTGGAATTGGGGCACGTGTGTGTGTTGGACAGCACTTAGCCATGACAGAACTGAAGGTGATTTTGTCTCTGATTCTGATGAAGTTTCACTTCTCTCTCTCACCAAGTTACTTGCATTCACCTGCATTTCATTTGGTTATAGAACCTGGCCATGGAGTTGTTCTTCAGATGTCAAGAATTTCAGCAACAATGTAA 1596 0.4211 MQKQRILMEIKTVEILLGVALVTLIHGLNVLVLRPRSMREKLKRQGIKGPSPHFYFGNIPEMKNIMLQVQSESATKVKEEDEEVSVSHKWPFTIFPHIQKWINQYGPIYLFSSGSIQWLMVSDIGMVKEVIMHTSLSLGKPTYLSKDLGPLLGKGIVTSSGPTWSHQRKIMAPELYLDKVKAMVNLMVDSTYTTLRSWEARVESEGAVSEIKIDEDLRSLSADIIARACFGSNYIEGKEIFSKLRDLQILLSKLHVGIPGFRYLPNKSNRQMWRLEKEIDSKISKLIKQRLVETHEQDLLQMILKGAKNSEGGDGLISDSISCDRFMIDNCKNIFFAGHETTAITASWCLMLLSVHQDWQDRVRAEVLEVCGKGAPDADMLRSLKTLTMVIQETLRLYPPATFVVRAALQDVNLKGFLIPKGMNIQIPVSVLQHDPGLWGPDAHKFNPERFANGVLGACKVPQAYMPFGIGARVCVGQHLAMTELKVILSLILMKFHFSLSPSYLHSPAFHLVIEPGHGVVLQMSRISATM* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0456 531 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 SUPERFAMILY Cytochrome P450 90 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Pvu10g0456 531 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 522 - -
Pvu10g0456 531 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 522 - -
Pvu10g0456 531 Pfam Cytochrome P450 99 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0456 531 Gene3D Cytochrome P450 35 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0456 Pvu-Chr10 6632573 6636796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0456 126 524 Cytochrome P450 AT5G24900 47.922 2.73e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0456 K24544 - gmx:100780335 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0456 10 6632573 6636796 Pvu10g0456 10 6632573 6636796 ECH