Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0454 ATGTCCTTCAATCAATCAAAGGTGGAAAAGAGCGACGTCGTTTACAGAAACGGACGATCCTCAGGCTTTAACCAGCAAAGAGGTTCCTACGGCAAGACTGGTGGCGATGGCGGTGGAATCAATCCATTATCCACTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGGCTAAATCCTTCCCAGGGAAATTCAACAGAGTCAAATAAGGCATCTGCAGCCCGGATCATTAGTAATGGTACCCATTTACAGTCCCAATTACATGGTGGATCAGATGGGCCAATTACAAAGTCATCTGAATCATCAACTGGACATAAGAGCACTGGAATTGTTCCAAAAGCTGCAACTGCTGCATTTCCCCCTTTGATTTCTGATCCTGTCCTTCCCACAAGCCCTGCCAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATCATTCCTGGCTTTATTAATGGGATGGAAATCCCTGCTCGTACAACATCAGCTCCTCCTAAATTTGATAAGCAGGAGCCTGATCAGGCTCTTGATGAATCTTACAAATCTGTGTCTTCGGTGCCAAATCCTCCTGTTCCAAAGCAGCAGAAACCGCACGGGAAAGAGGCTGGTGTCAATGAGCAATCTAATGTTGAGGAGATTAAGGCAAACAAGGATTCTCAGGCTCCTTTACAGTTTGGAGGTGCTAGTCCACAGATTCAATCTCAGGGCATGACAACAACGTCCCTCCAAATGCCTGTACCGATGCCTTTACCAATTGGTAATGCTACGCAAGTGCAACAACCAGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAGTTTTTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTCGTCAATATCCACAACAGCAAGGAGGAAAATTTGCTACTCCTCGAAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTCATAAAAGGATGGATGCATATTCAAATGGTGGGTCATCCGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTAAATCTTTTCCGACCACTCATCCTGTGAACTATTTTTCATCTAACTCATATAATACCAAGTCTCCCTATTATCCACCTAATTCTCTCCCATTAACAAATACCCCTATGCCTCCTAATTCTCAGCCACCAACATTTAATTTTCCTCTGTATCATGGTCCCCAAGGTGTGAGTTTTATGAATTCATCGTCACAAGGTTCCCCTCTTACTAATAAAACTAGCATTCCTGCTGGGATTACATCTATGACCATTAAGCCTAATGGTACAGCTACTATAGTGGACTTATCATCGTCCAATTCCTGTATTGCTGATGTTCAAAATGGAGAACCCCCTAGTTCAACAATATCCTGTGATGTTAGCTCCTCTGTGCTACAAAAAGGGTCGGAAACCTTGTCAGAAGTTTCTCCACAACAGTCTAAGTTTTCAAGAGATTTTGTCACAGTTGTGTCTAATAATGAAGGTGGACAGGAATCTCTCAGTATATCCAACTCTTTGAAGGATAAGAAACCAGGGAAGAAAGATCAATTATCACAAAATCAGGTTTCTGTACGGTCTCCCACAACGGACACTATGCCTTCTCGTGTTGTTGATCATGATATATCTGATATTGGAGTACCCGATGCTATAGGAACTAAAAAAAATCATTCTGCAACAATTATTAATGAAGATCTTCCAAGATCTAATACAATTTCTGCTGCTGTTGAAGTGGAGACCGATGGGTCTGTAGAAGCTCCTGGTTATGTTTCAGTGGAAGGAAATGCTGCACAAACTATTGACAAAGTTCACAATCAGATGCCTGATAAGACGTACGAATTAGTTGAAGGAAATTTTGGCTCATCAGATCTGCAGTCTACTGATCTTCCAAAAACAACACCAAAGCATGTTAAGAATGATTTAGAGAATGTTGATGGTGAGTCAGGTACCAAGGATAGACCAATTATGGAACCAAATAAGGTGAAAAATACATCTAAAGGGAAGAAGAAGAGAAAAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCCGGGGAAAAGAAAGAAGATGTCTTAAGTTCTGAGAGCAAGGAAAGTGCTACTGCTTCTCTAAGTTTGAAGCAATTTGATGTTGGTCAGTCAGATATTAAAGCCAGTGAGAAAGGTGATCATAATAAAGTTGAACTTGAAGATTGGGAGGATGTTGCCGACATGTCTACCCCTAAACTAGAGGTTCATGACATATCTCAAAAAGCAGGTGATGGACATGGAAGTACAACCAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTTCGTTGATCTTCCTGAAGATTTTGAAATCACTGCTGACATTGGTGCTTTGATGAATGGCAATATTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAGTTGTAGATAGACTAGGTGGGATGTCTCGGATGGATCGTCGTGGCGATGTGGTTGTGGAGGATGATAGATGGAACAAAGTTTCTGGTTCTTTTCGTGGACGTGGTCCGGAAGGCGTTGGTGGTAATTCAGGATTTCGATTTGGTCATGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAAGCACCGCTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAGGGTGGAAGAAATAGCCCTAACAGGGAGAGATGGCAGCGATCTGCTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCCGCCCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTATGAAGTGGGTAAAGTGACAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCGCAAAATTTTGACAAACTCTTTGAAAAGGTGAAAGAAGTTAGTATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGAAGTTAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAGGATCCAGATGAAGAAAACATTGAAGCTTTATGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAATCAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATTCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCCAAGCTGGTGGTAGGTCAAATCGTGGTCCTGCTAACAATCAATCGACAAGAAGGACTCCCATTGATTTTAGTCCAAGAGTATCATCTATCTTGTCATCTTCTAATTCTCAAATGGGTGGATTATGCGGTCTTCCACCTCAATCTCGTGGGTATGGTGGCTCTCAGGATGCTCAATTTGAGGAACAACAATCTTATGAAACTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGAGAAGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAATTTCCAATTTGCCAATATCTGAAGTGGTTCCTGTACCTAGAGACTCTCATAGAATGCCTACAGGTCTTAATGGTCAGAGTAATTCATCAGAGCGCACACAATATAACTCAAGGGAGGATATTGGGTCAAGACATGGTACTAACAAGTCTTTAGGTCCATCTACTCATGATCAATCAATTGCTCCAGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACCTGCTCCTCAAATTGCTTATTCAGATAACATTTTGTCGGAAGAAAAACTGAGGGACATGTCCTTGTCAGCCATAAGAGAATACTACAGTGCTAGAGATGAGAATGAAATTGCTTTGTGTATCAAAGATTTGAACTCCCCAAGCTTCTATGCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACAGAAAGAGATCTTTTGGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCATACATTGAGTCAAGTCCAACTCATCAAAGGGTTCGAATCTGTTCTCTGTACATTGGAGGATGTCGTTAATGATGCCCCTAGAGCACCAGAGTTTCTTGGCCGAATTTTTGCTCAAGCCATAATAGAGAGAGTAGCTACTTTGAATGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACATTGGAGGTAATTCAAAATGAAAAGGGAGACATGGTTCTAAATGAGATCCTTTCAAAAAGCTCTAATTTCCCATTGAAAACTTTCCAACCACCTGATGCTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4860 0.4097 MSFNQSKVEKSDVVYRNGRSSGFNQQRGSYGKTGGDGGGINPLSTARSFNKKSNNAQGGQSRLNPSQGNSTESNKASAARIISNGTHLQSQLHGGSDGPITKSSESSTGHKSTGIVPKAATAAFPPLISDPVLPTSPAKGDDESKAFPFQFGSIIPGFINGMEIPARTTSAPPKFDKQEPDQALDESYKSVSSVPNPPVPKQQKPHGKEAGVNEQSNVEEIKANKDSQAPLQFGGASPQIQSQGMTTTSLQMPVPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISFSPQMGNQLGNMGIGIGRQYPQQQGGKFATPRKTTHVKITHPETHEELRLHKRMDAYSNGGSSGARSHPNIPSQSQPVKSFPTTHPVNYFSSNSYNTKSPYYPPNSLPLTNTPMPPNSQPPTFNFPLYHGPQGVSFMNSSSQGSPLTNKTSIPAGITSMTIKPNGTATIVDLSSSNSCIADVQNGEPPSSTISCDVSSSVLQKGSETLSEVSPQQSKFSRDFVTVVSNNEGGQESLSISNSLKDKKPGKKDQLSQNQVSVRSPTTDTMPSRVVDHDISDIGVPDAIGTKKNHSATIINEDLPRSNTISAAVEVETDGSVEAPGYVSVEGNAAQTIDKVHNQMPDKTYELVEGNFGSSDLQSTDLPKTTPKHVKNDLENVDGESGTKDRPIMEPNKVKNTSKGKKKRKEILQKADAAGSTSDLYNAYKGPGEKKEDVLSSESKESATASLSLKQFDVGQSDIKASEKGDHNKVELEDWEDVADMSTPKLEVHDISQKAGDGHGSTTKKYSRDFLLKFVEQFVDLPEDFEITADIGALMNGNIGGSHIFERDSHPSPGRVVDRLGGMSRMDRRGDVVVEDDRWNKVSGSFRGRGPEGVGGNSGFRFGHGGNFGVLRNPRAQAPLQYGGGILSGPMQSGGNQGGRNSPNRERWQRSANFQQRGLIPSPAQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEKVKEVSIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEEREVRRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSQAGGRSNRGPANNQSTRRTPIDFSPRVSSILSSSNSQMGGLCGLPPQSRGYGGSQDAQFEEQQSYETKTLSVPLPQRSLGEDSITLVPQGGLARGMSMRGSTTISNLPISEVVPVPRDSHRMPTGLNGQSNSSERTQYNSREDIGSRHGTNKSLGPSTHDQSIAPEHNVNHGNRNLRSVSPAPQIAYSDNILSEEKLRDMSLSAIREYYSARDENEIALCIKDLNSPSFYASMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTLSQVQLIKGFESVLCTLEDVVNDAPRAPEFLGRIFAQAIIERVATLNEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDMVLNEILSKSSNFPLKTFQPPDAKISRKLEKFI* 1620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0454 1619 Pfam MA3 domain 1436 1542 IPR003891 -
Pvu10g0454 1619 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 590 1609 - -
Pvu10g0454 1619 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 228 409 - -
Pvu10g0454 1619 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 94 208 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1208 1302 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1233 1276 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 545 561 - -
Pvu10g0454 1619 SMART ma3_7 1431 1545 IPR003891 -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1 31 - -
Pvu10g0454 1619 Gene3D - 1423 1619 - -
Pvu10g0454 1619 SUPERFAMILY ARM repeat 982 1210 IPR016024 -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 126 147 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 661 691 - -
Pvu10g0454 1619 Gene3D - 986 1221 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 921 940 - -
Pvu10g0454 1619 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 590 1609 IPR045208 GO:0003743
Pvu10g0454 1619 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 228 409 IPR045208 GO:0003743
Pvu10g0454 1619 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 94 208 IPR045208 GO:0003743
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 164 214 - -
Pvu10g0454 1619 SUPERFAMILY ARM repeat 1426 1617 IPR016024 -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1285 1302 - -
Pvu10g0454 1619 Pfam MIF4G domain 986 1208 IPR003890 GO:0003723|GO:0005515
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 353 376 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 43 113 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 925 940 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1357 1373 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 525 561 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1384 1414 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 349 376 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 649 734 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1078 1100 - -
Pvu10g0454 1619 SMART if4_15 986 1208 IPR003890 GO:0003723|GO:0005515
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1 113 - -
Pvu10g0454 1619 Coils Coil 1068 1088 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1331 1414 - -
Pvu10g0454 1619 MobiDBLite consensus disorder prediction 1208 1232 - -
Pvu10g0454 1619 ProSiteProfiles MI domain profile. 1430 1554 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0454 Pvu-Chr10 6616402 6627039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0454 1 1618 Eukaryotic Initiation Factors Gene Family AT3G60240 44.630 0.0 1189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0454 K03260 - gmx:100798562 2318.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0454 10 6616402 6627039 Pvu10g0454 10 6616402 6627039 ECH
Pvu10g0454 10 6616402 6627039 Pvu8g1437 8 23014104 23023886 PCT