Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0453 ATGCAGCTCACGCACCTGTGCCTTATCATGCCCTCAGATTATGATAAACTAGAGGCACTTCATGATGCAACCCCACCAAAACAAAAAGGGACACAGAAAAAGGTTAAGGCCAAAAGAGACTTCCAAGGGGCATGTGGAGGCCATGTTGTTGCTACCCTTCAAGGTTCCTTGACAAGGTTGTGTGACACAAAGTGGTGGAGTTGTCACTGGAATCTGTGCCAGCATGGTGCAAGAGAAACCAAGCAGATCAAGGCCTCATCATGTGTGTTTCATGACATGGAGGGTGTGCAACTCTCTTCCAAGATTGGAAGGGACAGCAACAATCCAAGGATTTTCAGCTATGCTGAACTGTACATAGGGTCAAGGGGTTTCTCTGAGGAGGAGGTTCTAGGCAGTGGAGGGTTTGGCAAAGTGTACAAAGCTGTTATGCCTAGCGATGGAACAGTGGTGGCTGTGAAGTGTTGCTTGGCAGGGAAGGGTGGCCAGTTTGAGAAGACTTTTGCAGCAGAACTAGCGGCAGTGGCACACCTTCGCCACAAAAACCTTGTTCCCTTGAGGGGTTGGTGTGTTTTTGAGGATCAACTTTACCTTGTGTATGACTACATGCCTAATCTCAGCCTTGACAGGGTGCTGTTTCGCAAGAACTTGAAGGAGGAGGCACTTGGGTGGGTGAGGCGTGGGAAAATTGTGAAGGGTTTGGCATGTGCATTGCACTATCTGCATGAGCAGTTGGAGACTCAAATCATTCACAGGGATGTGAAGACCAGCAATGTGATGCTTGATTCCCACTACAATGCTAGGTTGGGGGACTTTGGCTTGGCAAGGTGGCTTGAGCATGAGCTTGAGTATGAGTATGAGACTAGGAAAGCATCAACAACATCAACCAAGTTTGAGCATTTCAGGTTGAGTGAGACCACAAGGATTGGTGGCACAATTGGGTACTTGCCCCCTGAGAGCTTCCAGAGAAGGAGTATTGCTACCTCAAAATCTGATGTTTTCAGCTTTGGGATCGTTGTGTTGGAGGTGGTGTGTGGAAGGAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTGCTTGATTGGGTCAGAAGGCTTAGTGATGAAGGGAGGGTCATTGATGCTGGGGACACAAGGCTGATATACGGTTCCTACAAGGCTTTTGAGATGGAGCATTTGATTCACATAGGCCTCTTGTGCACACTCCATGACCCTCAGTTGAGACCAAGCATGAAGTGGATTGTTGAAGCACTTTCTGACATGTCAAACAAGTTGTCATTGCCAACACTCCCTTCATTTCACTCCCATCCTATGTACATCTCTTTGTCCTCCTCTTCTGAGACTAGTCCAAGCACCTCAAAAGGAACCTCAAAAGGCACTTCCTCAGGCACAACAACAGAAAGTTCAAGCAATCTTACTAGTTCCATTTCCAAATATGTCACAGCCACAGGAGATACCATCTATGTAACTGCTGAAGCTGAACAGAGAACCGATGGAACTAACTCTGCTAAGAGTAGCAAGAGAACCATGCATCAGCAGCCATCATTTTCTGTGGTTCAAACACCTAGGGAGATACCATTCAAGGAGATTGTTTCAGCCACAGATAACTTCTCAGAGTCCAAAAGGGTGGCCGAGTTAGACTTTGGAACTGCTTACCATGGCATCCTAGATGGCCACAACCATGTCATGGTGAAACGCCTTGGCTTGAAGACATGTCCTGCACTGCGCCGAAGATTTTCCAATGAGCTAAGAAACCTGGCAAAACTTCGCCACAGGAATTTGGTGCAGCTTAGAGGGTGGTGCACTGAGCAAGGAGAGATGCTTGTGGTGTATGATTACTCAGCTAGAAGATTTCTCAGTCACCAACTTAACCATCATAACAATTGTACTAAAAATGGTTATTCTGTTCTCAAATGGCATCATAGGTATAACATAGCAAAATCACTTGCATCTGCACTTCTCTATCTGCACGAGGAATGGGATGAACAGGTGATTCACAGGAACATAACCTCTTCAGCAGTGACTCTTGAACCTGACATGACCCCAAGACTAGGTAGTTTTGCTCTGGCTGAGTTTCTGTCAAGGAATGAACATGGCCATCATGTGATCACCACCAGGAACAAGTCTGTTTGTGGGATTTACGGCTACATGTCACCAGAATATGTGGAATCCGGAGAGGCAACAGTGGCTTCTGATGTTTATAGTTTTGGTGTGGTGGTGCTTGAGATTGTGAGTGGACTTAAGGCTGTGGATTTTAGGCAACCTGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGATGAGGAAAAAATCACTTGAGGCACTAGCAGATATACGACTCAATGGAGAGTACAATTACAAGGAGCTAATGAGATTGGTAAGGTTAGGTGTTGCATGCACCCGTTCTGACCCAAAACTGAGACCAAGCACAACACAGATAGTGAGCATCCTTGATGGAAATGAGAAATTAATCATGGTGGAGAACATGGAGAGCAGGGAAGATTGGAGAGAAAGAAACTCTTGCTCTTTGTCACTGGTTAAGAGAATCCAAGCTCTAGGAATACAATGA 2574 0.4596 MQLTHLCLIMPSDYDKLEALHDATPPKQKGTQKKVKAKRDFQGACGGHVVATLQGSLTRLCDTKWWSCHWNLCQHGARETKQIKASSCVFHDMEGVQLSSKIGRDSNNPRIFSYAELYIGSRGFSEEEVLGSGGFGKVYKAVMPSDGTVVAVKCCLAGKGGQFEKTFAAELAAVAHLRHKNLVPLRGWCVFEDQLYLVYDYMPNLSLDRVLFRKNLKEEALGWVRRGKIVKGLACALHYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGLARWLEHELEYEYETRKASTTSTKFEHFRLSETTRIGGTIGYLPPESFQRRSIATSKSDVFSFGIVVLEVVCGRRAIDLTYPDEKIILLDWVRRLSDEGRVIDAGDTRLIYGSYKAFEMEHLIHIGLLCTLHDPQLRPSMKWIVEALSDMSNKLSLPTLPSFHSHPMYISLSSSSETSPSTSKGTSKGTSSGTTTESSSNLTSSISKYVTATGDTIYVTAEAEQRTDGTNSAKSSKRTMHQQPSFSVVQTPREIPFKEIVSATDNFSESKRVAELDFGTAYHGILDGHNHVMVKRLGLKTCPALRRRFSNELRNLAKLRHRNLVQLRGWCTEQGEMLVVYDYSARRFLSHQLNHHNNCTKNGYSVLKWHHRYNIAKSLASALLYLHEEWDEQVIHRNITSSAVTLEPDMTPRLGSFALAEFLSRNEHGHHVITTRNKSVCGIYGYMSPEYVESGEATVASDVYSFGVVVLEIVSGLKAVDFRQPEVLLVKKVHEFEMRKKSLEALADIRLNGEYNYKELMRLVRLGVACTRSDPKLRPSTTQIVSILDGNEKLIMVENMESREDWRERNSCSLSLVKRIQALGIQ* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0453 857 SMART serkin_6 124 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0453 857 Gene3D Phosphorylase Kinase; domain 1 96 201 - -
Pvu10g0453 857 MobiDBLite consensus disorder prediction 445 474 - -
Pvu10g0453 857 ProSiteProfiles Protein kinase domain profile. 538 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0453 857 ProSiteProfiles Protein kinase domain profile. 124 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0453 857 PANTHER - 1 856 - -
Pvu10g0453 857 Pfam Protein kinase domain 125 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0453 857 Gene3D Transferase(Phosphotransferase) domain 1 202 428 - -
Pvu10g0453 857 CDD STKc_IRAK 549 821 - -
Pvu10g0453 857 Pfam Protein tyrosine and serine/threonine kinase 542 818 IPR001245 GO:0004672|GO:0006468
Pvu10g0453 857 MobiDBLite consensus disorder prediction 492 520 - -
Pvu10g0453 857 SUPERFAMILY Protein kinase-like (PK-like) 107 452 IPR011009 -
Pvu10g0453 857 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 856 - -
Pvu10g0453 857 SUPERFAMILY Protein kinase-like (PK-like) 515 822 IPR011009 -
Pvu10g0453 857 ProSitePatterns Protein kinases ATP-binding region signature. 130 159 IPR017441 GO:0005524
Pvu10g0453 857 Gene3D Phosphorylase Kinase; domain 1 497 614 - -
Pvu10g0453 857 Gene3D Transferase(Phosphotransferase) domain 1 620 843 - -
Pvu10g0453 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0453 Pvu-Chr10 6611080 6613931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0453 522 825 Receptor kinase-like Gene Family AT5G59270 36.721 1.88e-53 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu10g0453 PK_Tyr_Ser-Thr 3.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0453 - - gmx:100781955 1453.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0453 10 6611080 6613931 Pvu8g1439 8 23154444 23156969 PCT