Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0451 ATGGACCAAATGGATGATGAGTCATGGCAAAAATGGGTTCCAATTATGGAAAACAATGACTGGCATATTTTCAGTGATTTTGACATGAACTCTGCTGGAGAAGAACTTAAGGAGGATGATAGTTCAGTGGATCCTGAAGAAGTCTCATGGAAAGAAAACACAGCTACCCTTCTAACCAATTTTTTATCTTTGGAAGAGAACACTGCCTTTGACATGCCAAGTCTCACACAGCAAGCTTCTCCACATAAACCACAAACTTGTGTTCTGTCATTTGAGGATTCCACTTCAGTGCCAACTGTTGCCAAGAAAACATGCCAACCAAATCTTGGTGAACAACCAAAGCAGACACAAGAAGAAAAGCCACACCACAGAAAATCCCTCAAGAGGGAAAGAACCTCTCCTCAGACAGCAGATCACATATTAACTGAGAGAAAAAGGAGAGAGAATATCACCAGAATGTTCATTGCTCTTGCTGCCCTTATTCCTGGCTTGAAAAAGATGGACAAGGTTTCTGTTCTTAGCAATGCTGTAGAGTACGTGAAGTATCTTCAGCAGCGAGTGAAAGATTTGGAGAAAGAGAAGCAGCAGAAGAGGAAGATAGAATCAGCAGGGTGCTTGAAACTAAGCAAAACCAACATGGTTGCTTATGACCTTTCATGGAGCTCTCATGTTTATGATGGTGCCAAAACCACCAAGAAATGTTCAAAAGTTGAAGCAAGAGTAGCAGGAAAAGATGTACTCATCAGGGTAACTTGTGAGATGCAAAAGAACATTGTTCGAGATGTAATGGCCAAGCTTCAAGCTCATAATCTCTCCATACTTTGCAGCAATGTTTTGCCTTTTGGAAATTCTGCTCTCGCCATTACCACCATTGCTGAGATGAACCCTAAGTTCACCATGGCAGTGGAGGACCTAGTGAAAAAGTTGAATGATGATTTGTCCAAGTGCTGTAGCCTGCAATATTAA 966 0.4151 MDQMDDESWQKWVPIMENNDWHIFSDFDMNSAGEELKEDDSSVDPEEVSWKENTATLLTNFLSLEENTAFDMPSLTQQASPHKPQTCVLSFEDSTSVPTVAKKTCQPNLGEQPKQTQEEKPHHRKSLKRERTSPQTADHILTERKRRENITRMFIALAALIPGLKKMDKVSVLSNAVEYVKYLQQRVKDLEKEKQQKRKIESAGCLKLSKTNMVAYDLSWSSHVYDGAKTTKKCSKVEARVAGKDVLIRVTCEMQKNIVRDVMAKLQAHNLSILCSNVLPFGNSALAITTIAEMNPKFTMAVEDLVKKLNDDLSKCCSLQY* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0451 321 Coils Coil 173 200 - -
Pvu10g0451 321 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 6 319 - -
Pvu10g0451 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 136 198 IPR036638 GO:0046983
Pvu10g0451 321 Pfam Helix-loop-helix DNA-binding domain 138 184 IPR011598 GO:0046983
Pvu10g0451 321 MobiDBLite consensus disorder prediction 104 137 - -
Pvu10g0451 321 Gene3D - 114 205 IPR036638 GO:0046983
Pvu10g0451 321 PANTHER BHLH TRANSCRIPTION FACTOR 6 319 - -
Pvu10g0451 321 MobiDBLite consensus disorder prediction 115 137 - -
Pvu10g0451 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Pvu10g0451 321 SMART finulus 140 189 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0451 Pvu-Chr10 6594213 6596171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0451 11 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 34.769 1.12e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu10g0451 HLH 3.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0451 - - vun:114166535 403.29