Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0448 ATGAAGTGCTTTTACTATTTCAAAGACAAATCTAGAAACAGTAAGCAAAGGTCAGCACCTGAACTGAAAAAGCAAGAGAAACTGGACTTTTCAGGAGCTGAAAGGATCACCAAGTCTTCATGCTCATCTGCCTCACCCCGCGGTATACCGGAACTGTATGAGGAGAAGGGTCACAATTTGAGGGTCTTCTCCATCTCAGAGCTCAAGCATGCAACAAGTGATTTCAACAGGCTTTTTCAGATAGGAGAAGGTGGTTTTGGAAGTGTGTTTAAAGGTTCAATCCAGCCTGCTGATGGGAAGGGGAATCCTACTGTAGTTGCCATCAAAAGGCTTAACAAGAATGCATTACAGGGTCACAAGGAATGGTTGACTGAAGTTCAGTTTCTTGGTGTTGTGGAACACCCAAATCTCGTAAAGCTTATTGGATACTGTGCTTTGGATGATGAACGAGGCATGCAGAGACTACTCGTGTATGAATACATGCCGAACAAAAGCTTAGAGTTTCATCTTTTCAATAAAGCATATGATCCTCTTCCTTGGAAAACTAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAACTTATCTGCATGAAGAATTAGAAATTCAGGTGATATATCGAGATTTCAAATCTTCAAATGTATTACTGGATAAAGACTTTAAGCCAAAGCTTTCAGATTTTGGACTTGCTAGGGAGGGGCCAGTAGCTGGTGATACTCATGTTTCAACAGCTGTGATGGGGACATATGGTTATGCTGCTCCAGATTACATTGAGACAGGTCATCTCACAGCCAAGAGTGATGTGTGGAGCTTTGGGGTGGTGCTATATGAAATGCTTACTGGAAGGCGTTCAATGGAAAGAAACAGGCCTAAACCAGAGAAGAAACTGCTGGAGTGGGTGAAGCAGTACCCTGCTGATAGCAAGAAGTTTGACACAATAATTGATCAGAGGCTTCAGGGAGAGTATTGCATGAATGGAGCAAGAAAACTGGCAAAACTTGCCGATCATTGCCTGCGAAAGAGTGCGAAAGACCGGCCAACGATGAGTCAGGTGGTGGAGAGACTGAAGCAGATAATGGAAGACTCTGATGAAGAGCAGCCTGCAGATGACAGAAGTGTTGAGGTATCAGAAAATGATGCAGCTGAAGCTGAAGTGAAGGCAAATCAGTTAGGCTCTTCAGAGTTGTGGAAAAGGAGAATGGAACATCTTGCAAAACTTGGTGAACGTGTGGAGAGTGTTAGTAGAAAAAGATTTATGATCCTTCAAAGAGCCAATGTGTCCTCATAG 1290 0.4318 MKCFYYFKDKSRNSKQRSAPELKKQEKLDFSGAERITKSSCSSASPRGIPELYEEKGHNLRVFSISELKHATSDFNRLFQIGEGGFGSVFKGSIQPADGKGNPTVVAIKRLNKNALQGHKEWLTEVQFLGVVEHPNLVKLIGYCALDDERGMQRLLVYEYMPNKSLEFHLFNKAYDPLPWKTRLEIALGAAQGLTYLHEELEIQVIYRDFKSSNVLLDKDFKPKLSDFGLAREGPVAGDTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSMERNRPKPEKKLLEWVKQYPADSKKFDTIIDQRLQGEYCMNGARKLAKLADHCLRKSAKDRPTMSQVVERLKQIMEDSDEEQPADDRSVEVSENDAAEAEVKANQLGSSELWKRRMEHLAKLGERVESVSRKRFMILQRANVSS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0448 429 CDD STKc_IRAK 81 359 - -
Pvu10g0448 429 MobiDBLite consensus disorder prediction 360 388 - -
Pvu10g0448 429 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0448 429 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Pvu10g0448 429 PANTHER OS01G0588500 PROTEIN-RELATED 27 419 - -
Pvu10g0448 429 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Pvu10g0448 429 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Pvu10g0448 429 Gene3D Transferase(Phosphotransferase) domain 1 161 385 - -
Pvu10g0448 429 PANTHER OS07G0495150 PROTEIN 27 419 - -
Pvu10g0448 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pvu10g0448 429 SUPERFAMILY Protein kinase-like (PK-like) 58 356 IPR011009 -
Pvu10g0448 429 PIRSF ILK 58 372 - -
Pvu10g0448 429 PIRSF ILK 10 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0448 Pvu-Chr10 6535734 6540624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0448 61 397 Glycoside Hydrolase AT3G07070 44.986 2.23e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu10g0448 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0448 - - gmx:100784625 751.51