Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0446 ATGCTCCGCCGTGCTACCTCCTCCCTCCTCTCCGGAGTCTCTCGCCGACGCCTCTCCACCGACGCACCGGCAACGCCCGTTGTGAATTCAAGCTTCGCGGAGGCGTGGAAGAAAGTGAGCCCGAATCTGGAGCCTCCGAAGACGCCGCTCTCGTTCATGAAGGCGCGGCCGCCGACTCCCTCGGCTCTCCCTTCCAAACTCACCGTCAACTTCGTCCTCCCCTACGCTTCCCAATTGTCCGCAAAAGAGGTTGACATGGTGATTGTACCAGCAACAACTGGAGAGATGGGTGTTCTGCCAGGACATGTAGCAACAATTGCTGAGTTGAAACCTGGTGTCCTCTCTGTTCATGAAGGGAACGATGTGACAAAATATTTTGTCAGCAGTGGCTTTGCATTCATCCACGCAAACTCTGTTGCTGACATAATAGCTGTTGAGGCCGTGCCGGTAGATCGAATTGATGCAAATCTAGTTCAGAAGGGCCTTCAAGATTTCACCCAGAAGCTCAACTCAGCCTCAACTGACTTGGAGAAAGCTGAGGCTCAGATTGGGGTGGACGTTCATAGCGCTCTCAACTCTGCTCTTTCAGCCTGA 594 0.5387 MLRRATSSLLSGVSRRRLSTDAPATPVVNSSFAEAWKKVSPNLEPPKTPLSFMKARPPTPSALPSKLTVNFVLPYASQLSAKEVDMVIVPATTGEMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQDFTQKLNSASTDLEKAEAQIGVDVHSALNSALSA* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0446 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pvu10g0446 197 Coils Coil 162 182 - -
Pvu10g0446 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
Pvu10g0446 197 Gene3D - 154 196 - -
Pvu10g0446 197 Gene3D - 55 153 IPR036771 -
Pvu10g0446 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 2 196 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pvu10g0446 197 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 72 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pvu10g0446 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pvu10g0446 197 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 2 196 - -
Pvu10g0446 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0446 13 197 Primary Pumps ATPases AT5G47030 71.892 5.25e-99 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0446 K02134 - gmx:100780778 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0446 10 6464311 6467074 Pvu10g0446 10 6464311 6467074 ECH