Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0374 ATGGTTCTGCATAGCTGGATTTTGAGTTACAATGTTGTTAGTTTCTTGTTGCTGATTAGTTGTGGCATGACCTATGGGACTGAGACTGATATCTTCTGCTTGAGAAGTATCAAAGAAGCCCTTGAAGACCCCAGTAACTATTTGAAGTTTTCTTGGGATTTCAACAACAGAACTGAAGGGTTCATCTGTAAGTTTATTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAAACTGTCCAATATGGGACTCAAAGGCCAGTTTCCTCGTGCCATTCAAAATTGCTCTAGCTTAACTGGGTTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGAAGATATATCTACTCTTGTACCATTTGTCACGTCTCTTGATCTTTCTTCAAATGATTTTTCTGGGGCGATTCCTGTGACTCTTTCAAATTGTACCTTTCTCAATAGCCTGAAACTTGATCAGAACGGACTCACTGGTCAGATTCCTCTACAACTTGGTATTCTCCCACGGATCAAGACGTTTTCTGTATCCTACAATCTTTTGATGGGGCAAGTTCCAAGCTTTGGCCATTCAGTTTCGGTAAATTATGCAAATAATCAAGGCCTATGTGGAGGTAATGGATTGGGGACTTGCCAAACCAAGAATTCTAAGAGTAACATGGCTGTTATTGCTGGAGCTGCCGCCGGTGGGGTGACTCTTGCGGCTTTAGGATTGGCTATTGGAATGTTCTTTTTTGTTCGACGTGTTTCTTTCAAGAAGGAAGAGGACCCCGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACAAATTAAGGTTTCTATGTTTGAGAAATCAATCTCAAAAATGAAGTTGGTTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGTCAGGAAGAACAGGAACTGTTTACAAAGCTGTCATTGGAGATGGCACAACACTTATGGTTAAGAGATTACAGGAATCTCAGTATCCTGAAAAGGAATTCATGTCTGAGATGGGTACACTAGGGACTGTCAAGCATCGCAACCTTGTTCCTCTTTTAGGCTTTTGCATGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAATCTCCATGACCAACTCCATCCCGCCGATGGTGTGAGCACCCTTGACTGGACTACAAGACTCAAAATTGCAGTTGGAGCAGCCAAAGGGTTCGCATGGCTTCATCATAGCTGCAATCCCCGTATTATCCACCGAAACATAAGCTCAAAGTGCATCTTGTTGGACGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCCAGACTCATGAACCCAATTGATACCCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTGGGTTATGTTGCTCCTGAGTACGCAAGAACTTTGATTGCCACACCCAAGGGGGATGTTTATAGCTTTGGGACTGTTCTCCTTGAGTTGGTGACTGGTGAAAGACCTACCAATGTGGCTAAAGCTCAAGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTAACAAACAATGCAAAACTCCATGATGCCATTGATGAATCATTAGTCAACAAGGATGTTGACAGTGAGCTTTTCCAATTTCTGAAGGTTGCATGCAACTGTGTTCTGCCAACTCCAAAGGAGAGGCCAACCATGTTTGAAGTGTATCAGTTTTTAAGAGCTATTGGGGCTAGATACAATTTCACAGCTGATGATGAGATCTTGGTACCTACTGATAATGGCGATGCTGATAACTTGGAGGAACTTATTGTAGCTCGAGAATGA 1830 0.4208 MVLHSWILSYNVVSFLLLISCGMTYGTETDIFCLRSIKEALEDPSNYLKFSWDFNNRTEGFICKFIGVECWHPDENRVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGTIPEDISTLVPFVTSLDLSSNDFSGAIPVTLSNCTFLNSLKLDQNGLTGQIPLQLGILPRIKTFSVSYNLLMGQVPSFGHSVSVNYANNQGLCGGNGLGTCQTKNSKSNMAVIAGAAAGGVTLAALGLAIGMFFFVRRVSFKKEEDPEGNKWARSLKGTKQIKVSMFEKSISKMKLVDLMKATNNFSNTNIIGSGRTGTVYKAVIGDGTTLMVKRLQESQYPEKEFMSEMGTLGTVKHRNLVPLLGFCMAKKERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAVGAAKGFAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLIATPKGDVYSFGTVLLELVTGERPTNVAKAQETFKGNLVEWITELTNNAKLHDAIDESLVNKDVDSELFQFLKVACNCVLPTPKERPTMFEVYQFLRAIGARYNFTADDEILVPTDNGDADNLEELIVARE* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0374 609 SUPERFAMILY Protein kinase-like (PK-like) 277 574 IPR011009 -
Pvu10g0374 609 Pfam Protein tyrosine and serine/threonine kinase 303 573 IPR001245 GO:0004672|GO:0006468
Pvu10g0374 609 SUPERFAMILY L domain-like 29 195 - -
Pvu10g0374 609 PANTHER LRR RECEPTOR-LIKE KINASE 5 588 - -
Pvu10g0374 609 PANTHER RECEPTOR-LIKE PROTEIN 55 5 588 - -
Pvu10g0374 609 Gene3D Transferase(Phosphotransferase) domain 1 375 591 - -
Pvu10g0374 609 ProSiteProfiles Protein kinase domain profile. 300 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0374 609 Gene3D Ribonuclease Inhibitor 28 217 IPR032675 -
Pvu10g0374 609 CDD STKc_IRAK 306 574 - -
Pvu10g0374 609 Gene3D Phosphorylase Kinase; domain 1 261 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0374 Pvu-Chr10 5285366 5288993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0374 7 588 Receptor kinase-like Gene Family AT3G28450 46.037 6.33e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pvu10g0374 PK_Tyr_Ser-Thr 2.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0374 - - gmx:100305365 954.125