Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0367 ATGAATATTTTCGATATTCTCTTCCAAAACATCATTCTTAAGGTAGAATACTACTTTGTCTTTCTTGTTGCCATGGAACATGAGCAGAAAACCATCACCACCAAGTTTGTGAAATCCAAATTCTTCTTCCCCAAAGTTATTCGCATTTCAGCAACTGATCAAAACGCCACAGATTCCTCTAGCGAGGAAGAAGACGAAGAAGGGAGGTTTCTTCAACTTCGTAGAGTTAAAAAAGTGGTTAATGAGATAAGAATTGTGCATGCAGACGAAACAAAAGAACACGACAACAATAGTTGTTATTGTTGTTCAACCAAATACAATGAAAGTATGGAACAACAACACCACCATCAACAAAGACAGAATATTAAAGGACACAAGTTTCGCGGCGTGCGCCAGCGGCCTTGGGGACGTTGGGCCGCCGAGATAAGAGACCCTTTCCGGCGAAAGCGAGTGTGGCTTGGAACCTTCGACACCGCGGAAGAAGCTGCTATGGTTTACGACAGAGCTGCTATAAGCTTCAGAGGTGCCGATGCTGTAACTAATCTCATCAAACCGCCGCTAAAAGACAGCGAAAGTGTTGTTAAACGGACGAGTTGTTACGGATGTGCCTCACCCACTTCGGTTCTCTTGTTCCAGCCTTGGATGGAACCTTTGTCTTCGGAAGAAACCTTCAAAGAAGAAGTGTTTGATGGATTAAAAGATGAAGTTGATAGTTTCTTGTTTTCTGATCATGCTCTTTATTATGATCAACCTCTTCCTACTATGTTTTCAGACGTTGATGTTTCATTGGATGAGGATCTTGAATCATGTAAATGGGATGTAGATAGTTATTTCACTGATGATCCTTTTCACTAA 855 0.4152 MNIFDILFQNIILKVEYYFVFLVAMEHEQKTITTKFVKSKFFFPKVIRISATDQNATDSSSEEEDEEGRFLQLRRVKKVVNEIRIVHADETKEHDNNSCYCCSTKYNESMEQQHHHQQRQNIKGHKFRGVRQRPWGRWAAEIRDPFRRKRVWLGTFDTAEEAAMVYDRAAISFRGADAVTNLIKPPLKDSESVVKRTSCYGCASPTSVLLFQPWMEPLSSEETFKEEVFDGLKDEVDSFLFSDHALYYDQPLPTMFSDVDVSLDEDLESCKWDVDSYFTDDPFH* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0367 284 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Pvu10g0367 284 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Pvu10g0367 284 Gene3D AP2/ERF domain 125 183 IPR036955 GO:0003700|GO:0006355
Pvu10g0367 284 SMART rav1_2 126 190 IPR001471 GO:0003700|GO:0006355
Pvu10g0367 284 PANTHER - 35 281 - -
Pvu10g0367 284 SUPERFAMILY DNA-binding domain 126 182 IPR016177 GO:0003677
Pvu10g0367 284 Pfam AP2 domain 126 175 IPR001471 GO:0003700|GO:0006355
Pvu10g0367 284 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Pvu10g0367 284 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 35 281 - -
Pvu10g0367 284 CDD AP2 126 181 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0367 Pvu-Chr10 5211022 5213130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0367 28 220 AP2-EREBP Transcription Factor Family AT4G27950 40.553 5.57e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu10g0367 AP2 3.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0367 - - pvu:PHAVU_010G035200g 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0367 10 5211022 5213130 Pvu8g1483 8 26165173 26168080 PCT