Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0353 GGCGAGCTTAATTTCCTGTACTTGCAAGGCAACAATCTTAGTGGTTCCATACCGATATCCATTGCTAACTTGAGCCGTCTTTTAGTACTCCAACTTGGGGAAAACCACCTAAGAGGTGTGATTCCAAACATGCCATTGCATCTGCTGGTTTCATTGAATCTTAGTAGCAACCTCTTTAGTGGTCCTATTCCTAGCAGTTTTGGTGCTTTGAGTACCCTGGAAGTCTTGGATCTCTCAAATAACAGCTTTTCTGGTCAAATTCCTGATTATCTTACTAACATGCAGTCTTTGACTCGGTTGATACTTTCTAACAATCCTCTGTCTGGTGAAATCCCAAAATTCAGTCACAATGTTAATGTTGAATATTTTGGAACTGGCCTAAAAAACAATACTGAACAGGACAACCGAAATTCCAACACGGAGTCCAAGAAGAATGGAATATCCCTTGCAGTTGCGATTCTCATTGCAATTGTAGCAGCTATTTTTCTTGTTGGCCTAGTCACTCTGTTGGTTGTGTCAGCGTCACGCCTTTATCACAGGGTTAGTGACGAGCATTTACAGTCAAGAGAAGATCGTCAACATCCTCAGGTCATGCAAAGTAATTTGTTAACTCCTAATGGAATGCATAGATCAAATATTGACTTCTCCAAAGCCATGGAAGCTGTTGCTGAAACATCAAATGTTACTCTTAAAACAAGGTTTTCAACTTATTACATGGCTGTCATGCCGTCTGGTTCAACCTATTATGTCAAGAAACTGAACTGGGTTGACAAGATATTCCAATTGGGAAGTCATGATAATTTTGTTAAAGAGGTAGAAGTATTGGCAAAATTGAACAATTCCAATGTCATGACTCCTTTGGCCTATGTTCTGTCCACTGACACTGCTTATATACTATACGAGTATATCTCAAATGGCTCCCTCTTTGATGTTCTTCATGGAAGCATGGATGTGTCTTTAGATTGGGCTAGCAGATACAGTATAGCTGTTGGAGTGGCTCAAGGACTTTCTTTTCTTCATGGATTCGCCTCTAGTCCAATACTACTCCTTGACCTGTCAAGTAAAAGTATTATGCTCAAGTCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTCATTGATCCCTCAAAGAGTACGGGGAACTTTTCTGCAGTTGCTGGTTCAGTAGGCTATATTCCTCCAGAGTATGCATACACAATGACAGTAACAATGGCTGGGAATGTCTACAGCTTTGGTGTGATTCTGCTTGAACTGCTGACAGGAAAACCTGCAGTGACTGAGGGAACGGAATTGGTCAAGTGGGTTTTGCGTAACTCCACAAACCAAGATTACATTCTTGACTTTAATGTCAGTAGAACATCACAAGCAGTCAGAAACCAGATGCTTGCAATTCTTGAGATTGCCCGTGTTTGTGTTAGTACATCCCCAGAATCAAGACCAAAGATGAAGAGTGTGCTGAGGATGCTCTTAAATGCTAGATGA 1491 0.4118 GELNFLYLQGNNLSGSIPISIANLSRLLVLQLGENHLRGVIPNMPLHLLVSLNLSSNLFSGPIPSSFGALSTLEVLDLSNNSFSGQIPDYLTNMQSLTRLILSNNPLSGEIPKFSHNVNVEYFGTGLKNNTEQDNRNSNTESKKNGISLAVAILIAIVAAIFLVGLVTLLVVSASRLYHRVSDEHLQSREDRQHPQVMQSNLLTPNGMHRSNIDFSKAMEAVAETSNVTLKTRFSTYYMAVMPSGSTYYVKKLNWVDKIFQLGSHDNFVKEVEVLAKLNNSNVMTPLAYVLSTDTAYILYEYISNGSLFDVLHGSMDVSLDWASRYSIAVGVAQGLSFLHGFASSPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSAVAGSVGYIPPEYAYTMTVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVLRNSTNQDYILDFNVSRTSQAVRNQMLAILEIARVCVSTSPESRPKMKSVLRMLLNAR* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0353 496 Gene3D Ribonuclease Inhibitor 1 136 IPR032675 -
Pvu10g0353 496 SUPERFAMILY Protein kinase-like (PK-like) 234 492 IPR011009 -
Pvu10g0353 496 Pfam Protein kinase domain 234 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0353 496 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 496 - -
Pvu10g0353 496 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 496 - -
Pvu10g0353 496 Pfam Leucine rich repeat 49 107 IPR001611 GO:0005515
Pvu10g0353 496 Gene3D Transferase(Phosphotransferase) domain 1 303 496 - -
Pvu10g0353 496 ProSiteProfiles Protein kinase domain profile. 223 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0353 496 Gene3D Phosphorylase Kinase; domain 1 185 302 - -
Pvu10g0353 496 SUPERFAMILY L domain-like 3 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0353 Pvu-Chr10 4976870 4979228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0353 3 492 Receptor kinase-like Gene Family AT2G41820 36.486 1.26e-88 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu10g0353 Pkinase 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0353 - - pvu:PHAVU_010G033800g 925.62