Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0341 CACACACCTTCATTGCTCAACTTTCTCACATTATCTTCCACCAATTTAACCCTACTTGCACACAACCCTGTGTTAATTTCTATGGATTTGGAAGCTGTGGCAGAAACAGTTGAAAATTGTACTGATAAAATATCAGCAGCATTTGAAGGCAGTTCTATTGTGGAGCCAAATGTTGGTATGGAGTTTGATTCAGAGGAAGCTGCCAAGAACTTTTATGATGAGTATGCAAGGCAGGAAGGGTTTGTTGTGCGCCTTGATCGCTGCCATCGTTCTGAGGTTGACAACCGAATCATTTCGCGCCGTTTTTCATGCAATAAGCAAGGTTTTCATGTGAGGGTTAGAAATAAAACCAAGCCTGTTCATAAACCAAGGACTAGCATAAGAGAAGGTTGTGAAGCCATGATGTTGGTTAAAGTTAATAAATGTGGGAAGTGGGTGGTTACTAAATTTGTGAAGGAGCACAGTCATCTGCTAAATGCTTCTGGTTCTCCTTCATATAGTAAAATGATTGAGTCAAAGGATAGGATAATTCAACAACTCACAAAGGAACTTGAGTACAGAGATCGATTATGTCAGCAATATCGCAGACAACTATTCTCCCTTCTGGAGACTGTTGAGGAACAAACAGAAAGCTTATCAAAAAATGTTGAGCTTGTTGTTAACAATATAAAAAATCTTTAG 681 0.3906 HTPSLLNFLTLSSTNLTLLAHNPVLISMDLEAVAETVENCTDKISAAFEGSSIVEPNVGMEFDSEEAAKNFYDEYARQEGFVVRLDRCHRSEVDNRIISRRFSCNKQGFHVRVRNKTKPVHKPRTSIREGCEAMMLVKVNKCGKWVVTKFVKEHSHLLNASGSPSYSKMIESKDRIIQQLTKELEYRDRLCQQYRRQLFSLLETVEEQTESLSKNVELVVNNIKNL* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0341 226 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 226 - -
Pvu10g0341 226 Pfam FAR1 DNA-binding domain 70 159 IPR004330 -
Pvu10g0341 226 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 14 226 - -
Pvu10g0341 226 Coils Coil 202 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0341 Pvu-Chr10 4785760 4788667 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu10g0341 FAR1 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0341 - - pvu:PHAVU_010G032600g 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1427 8 22572895 22580400 Pvu10g0341 10 4785760 4788667 PCT