Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0336 ATGAAGTTCAACATTGCAAATCCAACCACCGGCTGCCAGAAGAAGCTCGAGATCGATGACGATCTGAAGCTGCGAGCATTTTGGGACAAGAGAATTTCACAGGAAGTCCATGGAGATGCTCTGGGTGAGGAGTTTAAAGGATATGTGTTCAAAATCACTGGTGGTTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGCTAACACCTGGTCGTGTTCGTCTTTTACTCCACAGAGGAACTCCTTGCTTCCGTGGGTATGGAAGGCGCAATGGAGAGCGTAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGATCTCTCTGTTCTGAACTTGGTAATTGTGAAAAAGGGAGAAAGTGATTTACCAGGGCTTACTGACGTTGAAAAGCCAAGAATGAGAGGTCCAAAGAGAGCATCCAAGATTCGTAAGCTGTTCAACCTGTCTAAGGAAGATGACGTGAGGAAGTATGTCAACACATACCGTCGAACCTTCACAACAAAAGCTGGGAAAAAGGTGAGCAAAGCTCCAAAGATTCAACGACTTGTCACTCCATTGACACTGCAAAGAAAGCGCGCAAGGATTGCTGATAAGAAGAAGAGAATTGCAAAGGCAAAGTCGGAGGCAGCTGATTATCAGAAACTTCTTGCCTCCAGATTGAAGGAGCAGAGGGAACGCCGCAGTGAGAGTTTGGCAAAGAGGAGGTCCAAGATTTCCAGTGTTTCTAAGCAGCCTTCTGCCGCATAG 750 0.4707 MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVHGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKRRSKISSVSKQPSAA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0336 249 Gene3D - 133 234 - -
Pvu10g0336 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 247 - -
Pvu10g0336 249 MobiDBLite consensus disorder prediction 220 249 - -
Pvu10g0336 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
Pvu10g0336 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 247 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pvu10g0336 249 Coils Coil 189 216 - -
Pvu10g0336 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pvu10g0336 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pvu10g0336 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Pvu10g0336 249 MobiDBLite consensus disorder prediction 220 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0336 Pvu-Chr10 4708463 4712331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0336 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.486 7.98e-120 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0336 K02991 - gmx:100800507 437.958