Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0335 ATGGTGCTGCTACACATCTTTGTTGTAGCTGAAACCAGAAGCAACAAAATCATTGATCACTCTCTTCTTAAAGAAACTAGCAAAGTCTCAGGGGTAGTTTCATCTTCTGGTGAGATAAACCAAACCAGAAGAAACATAACAGTTGGTGATTCTCTTTTTGCAGAAACAACTAGCAACAACAACTCCTCAACGTGGGTGGTTTCACCTCTTGGTCACTTTGCCTTTGGTTTTCTTCCACTTGAGGACTCTAATCATTTCCTACTTTGCATTTGGTATGCTAAGATTCCTGACAAGACTGTTGTTTGGTATGCCAATGGAGACAGTCCTGCTCCAAAGGGGTCAAAGGTTGAACTCATTGATGATGATGGGTTAGTCCTCACTGCCCCAAATGGTGAGCAGTTATGGAAAACTAAGAGCCTTGATGGTAAAGTTCAGCAAGGTTTCTTAAAGGACAATGGAAACTTTGTGCTTCTTAATGAAAATCATCAGGGTGCGTGGGAGACTTTTAAGCATCCAAAGGACACCTTGCTGCCCTCACAAACTCTTGAAAAGGGTGAGAGGCTTTCATCAAGATTTCTAGAGTCAAATTACTCAGAAGGAAGGTTTGAGATGCTTCTTCAAATGGATGGCATTCTTTCCATTCATGCTTTAAACTCACCCTCTGCATATGCCAATGAAAACTACTATGAAAGTAGGACTGAAGAGTCCAACACATCAAGTCCTGGAACTCGGTTGGTGTTTGAACCATCAGGGTATGTGTATGTTTTGAGGAAGAACAGTGAGAAATACAACTTGTCAACATGGAGTGGAGCCTCTACTGATCAATCTTACTTCAGAGCAACTCTTAATTTTGATGGGGTGTTTACACTCTATCAACATTCAAAGAGTTTGCTTGGGAGTGATGGTTGGAGTGCTATTTGGTCTCAGCCAGATAACATATGTCTCAGTAGGCTTGCTACTGAAGGTAGTGGTGTTTGCGGGTTCAATAGTGTCTGCACCTTGGGAAGTAATCAAAGGCCAAGTTGCCAATGCCCAAAATGGTACTCTTTAGTTGATCCTAATGACCCCTATGGTAGCTGCAAGCCAGATTTCATACAAGGATGTGCAGAAGATGAGCTCATTGGAAAAGAAGATATAGCTGAATATGATTTTGAGATGTTGATAAATACAGATTGGCCACTTTCAGATTATGTGCTTCTTAAGCCCTTTACTGAGGAACAATGTAAACAGTCATGTTTAGAAGATTGTATGTGTGCAGTTACCATCTACAAATCAGGTAATGATTGCTTCAAGAAGAAGTTGCCTCTTTCAAATGGTAGAGTTGATGTTGGACTTAATGGTGCAAAGACTTTCATCAAAGTGAGGAAAGATAATTCCTCTTTGGTTGTTCCACAAGCCAAAGTGAATGAGAATAGTAAGAGCTCTTTGAGTTTGGTTGCTTGGGTACTTTTTGGAAGCTCTTCATTTCTCAATGTCATGCTTATTGCAGCCTTATGCATGAGCCTTTTCTTCATTTTTCAGTACAAGAAGAAGCATAGAGGAATTGGCAAAAGTGAGAATGCCCTTGAAACGAACTTGCGTTGCTTCGGTTATGAGGAGCTTGAAAGAGCTACAAATGATTTCCAAAAAGAGTTAGGAAGAGGGTCTTTTGGTGTTGTTTATGAAGGAGTCATAAACATAGGCTCAGAAATTCCAATAGCAGTGAAAAAATTGAACACTTTGCTTTTCCAACAGGTTGAGATAGAGTTCAAGAATGAGTTGCATGTCATTGGTCTCACTCATCACAAGAACTTGGTGCGGTTGATAGGCTATTGTGAGGCTGAAAAGGAAAGATTGTTGGTTTATGAGTACATGAGCAATGGCACTTTGGCAAGTCTTATTTTCAATAAGGTGAAACCTGAGTGGAAACTAAGGTTAGAGATTGCATTTGGGGTTGCTAGAGGACTAGCATATTTGCATGAAGAGTGCATCACCCAGATTATCCACTGTGACATAAAGCCACAAAACATACTCCTTGATGAGTACTATAATGTCAGAATTTCTGACTTTGGATTGGCCAAGCTCTTGAAGATGAACCAAAGCAGAACCAACACTGCCATAAGGGGAACAAAGGGGTATGTGGCACTTGAATGGTTTAAAAACATGCCTATCACAGCCAAAGTGGATGTGTTTAGTTATGGGGTGTTGTTGCTTGAGATCATTTGCTGCAGAAGAAATGTAGAAATGGATCTAGAGGAGGAAGAGAAGGGTATATTAACTGATTGGGCTTGTGATTGCTACTCAAGAGGCACTTTTGATCCCTTGGTTAAAGATGACAAGGAGGCATTGGATGACAAAAGGAACATGAAGAAGTTGATGATGATTTCCCTTTGGTGTATCCAAGAGGATCCAAGTCTTAGACCAACCATGAGAAAAGTTACACAGATGCTTGAAGGTGTTGTTGAAGTACAACCTCCACCATTCCCCTCACAATTTAGTAGACATTCTCAAAATCCCTGA 2499 0.4054 MVLLHIFVVAETRSNKIIDHSLLKETSKVSGVVSSSGEINQTRRNITVGDSLFAETTSNNNSSTWVVSPLGHFAFGFLPLEDSNHFLLCIWYAKIPDKTVVWYANGDSPAPKGSKVELIDDDGLVLTAPNGEQLWKTKSLDGKVQQGFLKDNGNFVLLNENHQGAWETFKHPKDTLLPSQTLEKGERLSSRFLESNYSEGRFEMLLQMDGILSIHALNSPSAYANENYYESRTEESNTSSPGTRLVFEPSGYVYVLRKNSEKYNLSTWSGASTDQSYFRATLNFDGVFTLYQHSKSLLGSDGWSAIWSQPDNICLSRLATEGSGVCGFNSVCTLGSNQRPSCQCPKWYSLVDPNDPYGSCKPDFIQGCAEDELIGKEDIAEYDFEMLINTDWPLSDYVLLKPFTEEQCKQSCLEDCMCAVTIYKSGNDCFKKKLPLSNGRVDVGLNGAKTFIKVRKDNSSLVVPQAKVNENSKSSLSLVAWVLFGSSSFLNVMLIAALCMSLFFIFQYKKKHRGIGKSENALETNLRCFGYEELERATNDFQKELGRGSFGVVYEGVINIGSEIPIAVKKLNTLLFQQVEIEFKNELHVIGLTHHKNLVRLIGYCEAEKERLLVYEYMSNGTLASLIFNKVKPEWKLRLEIAFGVARGLAYLHEECITQIIHCDIKPQNILLDEYYNVRISDFGLAKLLKMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVFSYGVLLLEIICCRRNVEMDLEEEEKGILTDWACDCYSRGTFDPLVKDDKEALDDKRNMKKLMMISLWCIQEDPSLRPTMRKVTQMLEGVVEVQPPPFPSQFSRHSQNP* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0335 832 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 826 - -
Pvu10g0335 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Pvu10g0335 832 Gene3D - 46 171 IPR036426 -
Pvu10g0335 832 PIRSF SRK 32 832 IPR024171 GO:0004674
Pvu10g0335 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 99 225 IPR036426 -
Pvu10g0335 832 Gene3D - 172 299 IPR036426 -
Pvu10g0335 832 SMART serkin_6 539 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0335 832 Pfam D-mannose binding lectin 99 184 IPR001480 -
Pvu10g0335 832 SMART blect_4 56 172 IPR001480 -
Pvu10g0335 832 ProSiteProfiles Protein kinase domain profile. 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0335 832 Gene3D Phosphorylase Kinase; domain 1 513 617 - -
Pvu10g0335 832 ProSitePatterns Protein kinases ATP-binding region signature. 545 570 IPR017441 GO:0005524
Pvu10g0335 832 SUPERFAMILY Protein kinase-like (PK-like) 526 825 IPR011009 -
Pvu10g0335 832 Gene3D Transferase(Phosphotransferase) domain 1 618 818 - -
Pvu10g0335 832 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 36 826 - -
Pvu10g0335 832 Pfam Protein kinase domain 542 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0335 832 ProSiteProfiles Bulb-type lectin domain profile. 49 170 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0335 Pvu-Chr10 4702117 4704615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0335 525 822 Receptor kinase-like Gene Family AT1G60800 39.117 9.43e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu10g0335 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0335 - - pvu:PHAVU_010G032000g 1683.31