Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0316 ATGAGCGACGGCGAAAGCGCCTCCGATCGATCGTTCGATTTCGAGGACGTGACAGTGGTCTCCGCCGTGGGGCGCGGCGCCAAGGGCGTGGTGTTCCTGGCGCGCGCCGGCGGCCGGTGGTCGAGCGAGTGCGTGGCGCTGAAAGTGATGTCGAAGGCGCTGATTGCGCAGAAGAGGACGAGAAAGGAGGAGGAGGAGTACGGGAGAGTGTCGTTTGAAGAGGAAGTGCTCCGTCGTTTCGATCACCCGCTCTTGCCAAGGCTGAGAGGCGTTTTGGAAACGGAGAAAGTGGTTGCGTTCGCCATTGATTACTGCCACGGTGGCACGCTCCACTCTCTCAGGAAGAAACAGACTGAGAAAATGTTCTCCGATGACACCATCAGGTTTTACGCTGTGGAATTGGTGCTTGCGTTGGAATATTTACACGAATTGGGAATAGTATACAGAGATTTGAAGCCAGAAAATGTGATGATTCAAGAAAACGGCCACATAATGCTCGTCGATTTTGATCTCTCCAAAAAGCTAAACCCTAAGTCCCCTAACTCACTGAGTCAAAACACGTCCCCGAGTCCTAACTCGGAGAAACGTTCAAGGAAACAACAACGATTAACTCGTTTATACAGTTTTTGTAACTCGGGCATCTCACCGTGGGACTCGGACTCGGAGCCCCCACTCGGTACCGCCGACTCAGTGCGTCGCACCGAGTCCGACTCAGTCGAGAAATCAAACTCGTTCGTCGGAACAGAGGAGTACGTGGCACCGGAAATCTTATCAGGGAAAGGTCACGGGTTTAGCGTAGATTGGTGGTCATACGGCATCCTTTTGTACGAGATGCTATACGGAACGACGCCGTTTAAGGGCTCAAATAAAAAAGAAACGTTTTACCGAATTTTAACAAAAACGGCAGAGTTAACCGGAGAGAAGACGGCGTTACGGGATTTAATTGGAAGATTGTTGGAAAAAGATCCTGAGCGTCGGATCCAGGTGGAGGAGATTAAGGGCCACGATTTCTTCAAAGGGGTTAAGTGGGACGAAGTGTTGCACATTGCAAGACCACCTTATATTCCCGAAAATGAGGTTGAGAACAAAGTGGGGTTTAGCAAAAACGACGTCGAAGTGTTCGTGAACCAAGTGTTTTTTCCCACGAATGATGATGATGGCGTTGAGAATTCTGATAACAACAACAACACAGCATGGGTTCGTGAATTGAATCACATTCCCACTCAGAAGAATGACGATTTTTTAATTTTTTGA 1254 0.4936 MSDGESASDRSFDFEDVTVVSAVGRGAKGVVFLARAGGRWSSECVALKVMSKALIAQKRTRKEEEEYGRVSFEEEVLRRFDHPLLPRLRGVLETEKVVAFAIDYCHGGTLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHELGIVYRDLKPENVMIQENGHIMLVDFDLSKKLNPKSPNSLSQNTSPSPNSEKRSRKQQRLTRLYSFCNSGISPWDSDSEPPLGTADSVRRTESDSVEKSNSFVGTEEYVAPEILSGKGHGFSVDWWSYGILLYEMLYGTTPFKGSNKKETFYRILTKTAELTGEKTALRDLIGRLLEKDPERRIQVEEIKGHDFFKGVKWDEVLHIARPPYIPENEVENKVGFSKNDVEVFVNQVFFPTNDDDGVENSDNNNNTAWVRELNHIPTQKNDDFLIF* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0316 417 ProSiteProfiles AGC-kinase C-terminal domain profile. 339 417 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu10g0316 417 MobiDBLite consensus disorder prediction 215 241 - -
Pvu10g0316 417 SMART serkin_6 17 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0316 417 SUPERFAMILY Protein kinase-like (PK-like) 18 365 IPR011009 -
Pvu10g0316 417 MobiDBLite consensus disorder prediction 178 194 - -
Pvu10g0316 417 Gene3D Transferase(Phosphotransferase) domain 1 238 357 - -
Pvu10g0316 417 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Pvu10g0316 417 PANTHER FLIPPASE KINASE 1-RELATED 9 393 - -
Pvu10g0316 417 Gene3D Transferase(Phosphotransferase) domain 1 109 179 - -
Pvu10g0316 417 ProSiteProfiles Protein kinase domain profile. 17 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0316 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Pvu10g0316 417 MobiDBLite consensus disorder prediction 178 200 - -
Pvu10g0316 417 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 9 393 - -
Pvu10g0316 417 Pfam Protein kinase domain 231 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0316 417 Pfam Protein kinase domain 19 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0316 Pvu-Chr10 4404523 4406792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0316 1 417 AGC Kinase Gene Family AT3G25250 53.899 1.23e-152 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu10g0316 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0316 K20714 - gmx:100785773 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1392 8 21399088 21400804 Pvu10g0316 10 4404523 4406792 PCT