Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0312 ATGGTTTTGTGTCTTTTTTTGACTGTGTTGCATTATTGCTTTCTCTTCTTCTATCAGTTGATGACGTCATCAATTCCTCCCATGGAATTCGCTTCTTCATCATCCAAACTCCCACGGATGTACGATGTGCTCATCAACTTCAATGGAGAAGACATCCAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCCTCACCACCTTCCTTCACCACCCCAATGCACTCAACCCAACGCACATCCAACAACCTATTCTCAATCTCTGTCGTGTAGCAATTGTTGTTTTCACCAGAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATCAAATGGCACCAAACTTATTACCGACATGTTCTGCCCGTTTATTACGAAATTGAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGTGAAGCCTTCAAAGCAACTGCACAGGAAACATTCTCACGACAACAACTGGAGCATGGCATTTCCAGATGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAACAATCACAGGAGTGATGCAGAACTAGTGGATAAAATTGTTAAGATCGTTCTTAATTTACCACTCTTGTCTACAACTAAATTTCCAGTTGGATTACAATCCCGTGTGAAAGATGTGATTCTAACCATAAAAAGTAAATCCACCCAAGTTTTTACTATAGCGATATGTGGAATGGAAGGATCGGGTAGAACCACTCTTGCCAAAGCCATCTACAATCAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGATATTGCACAAGTTAGTCAAACAAGAGGGTATGTTCCTTTACAAGAACAATTTCTTTCAGATGTAGTAAAAACAAAGGTGGAGATAAGTGACGTTGAGATGGGAAAAAGTATGATTTGGGAAAGACTATATGGGAAAAGGGTGCTTCTTGTACTTGACGATTTGAATGACTATGGCCAATTAGGCCTCTGGGGAACTAGTTCATGGTTCGGTGAAGGAACTGTAATAATCATTACAATGAGAGAAGAAGACCTACCGAGTATGCATGAAGTTGATTCTGCTTTTCGTATTAATCCAATGAACGCAAACGAGTCCCTCGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAAAAGAATACCGTGTACTTGCAAAAAGAGTAGTTGCTTATTGTGGAGCACTACCTCTAGCTCTCGAAGTCATTGGAACTTATTTATACAAAAGGACGAAAGATGAATGGAATAGAGTATTGATAAGATTAGACAATATTCCCCAGCATGAAGTTCCACAGATATTGAAAATAAGCTTCGACGGTTTATCTAATCAAATAGAAAAAGATTTATTTCTTGATGTATGTTGTGTCTTTGTTGGTAAAAGCAGAGCCTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCCTGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCATCAAAGTTAAAGAAAACAACAAATTTGGAATGCATCATTTGCTACGAGAAATGGGAAGTGAAATTATTAGTGAAATTTCAAGAGAGGAATCTAGGAAGAACAGTCGACTGTGGTTTGATGAGGATTTACAACATGTACTGTCAGAGAACACTCTCTTTTCATCACCGGGTACAAAAGTCATTCAGAGATTGTATAACGGAAGAGATTTCTTCGAACGTTATCCTTTAGAGGTAAGAGACCCATCAAGACTGCTGAAATTCGCTGAAGATTACGAATTCCATCCTAAGAAACTGAGATGGATCAGTCTGCAAAGGTTTTCTTCAAAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGCGATTGATTTAAAACACAGTCTTCTTCGATTCCTTTGGAAAGAAACCCCCAAGGTTTTGGCGTGTCTAAAAGTCCTGAATCTTAGTCACTCGAAGTACTTGACAAAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCTAGATTGCGCCAAGTACACCAATCTATTGGATGTCTCTGCAATCTTATACTGCTAAATTTGAAGGACTGTACAAGTCTAAGCACTCTCCCCAGTGAGATATCAACCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACGCCAAGTTTGAACTATATGAGCAAGTAA 2193 0.3944 MVLCLFLTVLHYCFLFFYQLMTSSIPPMEFASSSSKLPRMYDVLINFNGEDIQRKFVSHLDSALSAVGLTTFLHHPNALNPTHIQQPILNLCRVAIVVFTRTYSQSAWCLHQLQQIIKWHQTYYRHVLPVYYEIEPSDVRLQKGDFGEAFKATAQETFSRQQLEHGISRWSHALTKAANFFGWDENNHRSDAELVDKIVKIVLNLPLLSTTKFPVGLQSRVKDVILTIKSKSTQVFTIAICGMEGSGRTTLAKAIYNQIHGTFTEKSFIEDIAQVSQTRGYVPLQEQFLSDVVKTKVEISDVEMGKSMIWERLYGKRVLLVLDDLNDYGQLGLWGTSSWFGEGTVIIITMREEDLPSMHEVDSAFRINPMNANESLELLSWHAFREPKPKKEYRVLAKRVVAYCGALPLALEVIGTYLYKRTKDEWNRVLIRLDNIPQHEVPQILKISFDGLSNQIEKDLFLDVCCVFVGKSRAYVTKILNGCGVDPDSGIRVLIKRNLIKVKENNKFGMHHLLREMGSEIISEISREESRKNSRLWFDEDLQHVLSENTLFSSPGTKVIQRLYNGRDFFERYPLEVRDPSRLLKFAEDYEFHPKKLRWISLQRFSSKYLPNDFYLHDAIAIDLKHSLLRFLWKETPKVLACLKVLNLSHSKYLTKTPDFSRLPSLEQLILKDCPRLRQVHQSIGCLCNLILLNLKDCTSLSTLPSEISTLQIFEVFWCNVTPSLNYMSK* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0312 730 Gene3D - 370 453 IPR042197 -
Pvu10g0312 730 Gene3D - 34 203 IPR035897 -
Pvu10g0312 730 Gene3D Ribonuclease Inhibitor 577 728 IPR032675 -
Pvu10g0312 730 Gene3D - 204 363 IPR027417 -
Pvu10g0312 730 PRINTS Disease resistance protein signature 237 252 - -
Pvu10g0312 730 PRINTS Disease resistance protein signature 312 326 - -
Pvu10g0312 730 PRINTS Disease resistance protein signature 404 418 - -
Pvu10g0312 730 PRINTS Disease resistance protein signature 638 654 - -
Pvu10g0312 730 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 183 IPR035897 -
Pvu10g0312 730 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 712 IPR044974 GO:0006952
Pvu10g0312 730 ProSiteProfiles TIR domain profile. 39 206 IPR000157 GO:0007165
Pvu10g0312 730 SUPERFAMILY "Winged helix" DNA-binding domain 440 546 IPR036390 -
Pvu10g0312 730 SMART till_3 40 180 IPR000157 GO:0007165
Pvu10g0312 730 SUPERFAMILY L domain-like 588 716 - -
Pvu10g0312 730 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 43 712 - -
Pvu10g0312 730 Pfam TIR domain 41 202 IPR000157 GO:0007165
Pvu10g0312 730 Pfam NB-ARC domain 222 436 IPR002182 GO:0043531
Pvu10g0312 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 463 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0312 Pvu-Chr10 4375277 4379568 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0312 17 720 WRKY Transcription Factor Family AT4G12020 27.001 5.57e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0312 - - pvu:PHAVU_010G029000g 971.844