Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0311 ATGATATGTGGAAAGGAAGGATCTGGTAAAACCACCCTTGCTAAAGCCATCTACTATCAACTTCATGATACATTCACGGAGAAAAGTTTCATTGAAGAGATCGGACAAGTTAGCGGAATAAGAGAGAATCTTGGTTTACTAGAACAACTCCTTTCAGATGTCCTAAAATCAAAGGTAGAGATAGATAGCTTTGAGATGGGAAGAACTATGATTCGGGAAAGACTTCCTGGAAAAAGGGTGCTCATTGTACTTGACGATGTGCCTGAGCTTAATAGACAATTACTATGGGAATGCCGTCATGACTTAGGAGGAGGAAGTGTAATAATCATTACAACAAGATCTGAAATCTTACTGAGGATATATCAAGCTGATTCTGTTCTTCAGGTAAAGTCAATGAACGCCAACGAGTCCCTTGAGTTTCTTAGTTGGCACGCATTTAGAGAAACAAAACCAAAACAAGAATACCATCTCCTTGCAGAAAGAGTAGTTTCGTGTTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAACTTATTTATATGAAAGGACGAAAGAAGAATGGAATTCAGTATTGTTACTATTAAACCGAATTCACCAGCACAATGTTCAATGGAAATTGAAAATAAGTTTCGACGGTTTACGCAATCAAATGGAAAAAGATTTATTTCTTGATGTATGTTGTTCCTTTGTTGGTAAGAGCAGAACCTATGTTACGAAGATCCTAAATGGCTGTGGAATAGACGCTGATAGTGGAATAAAAGTTCTCATAAAGCATAGTCTCATACAAATTAATAAGAACAACAAATTAATAATGCATTCGTTGCTACGAGAAATGGGAAGAGAAATTATTAGTAAAATTTCAGGAAAAGAACCTGAGAACAGTAAACTGTGGTTTGATAAGGATGCAAGATATTCACTGTTAGAGAATACGCTCTTTTCATCTAAGGGCACAAAAGTCATTCAGAGTTTGCCTATCGGAAGAGATTTCTTCGGACGCTATCCTTTACAGGTAAGAGACTCAACGAGACTGCTGGAAGTCGCTGGAGATTCTGAGTACCATTTTAAGAATCTTAGATGGATCAGTTTGGGAGGGTTTTCTTCAGAATACCTACCTAACCACTTTTATCTGCATGATGCAATAGCCATTGATTTAAAACACAGTCTTCTTCGATTCGTTTGGAAAGAACCTCAGGTTTTGACGCTGCTAAAAGTCCTTGATCTCAGTCACTCAAAGTATTTGATAGAAACCCCTGATTTTTCCGGACTCCCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGATTGCGCCAAGTACACCAATCTATTGAATGTCTCTGCTATCTTACATTGCTAAATTTGCAGGACTGTACAAATCTAAGCAATCTCCCCAGAAAGATATATAAGTTGAAATCCTTAAAAACTCTGATTTTATCTGGTTGTTCGAAGATTGACTTAATGGAAAAAGATATAGTGGGATTGAAATCCTTGATAACTATAATGGCTGAAAATACAGTTACTAAACAATTGCCTTTTACAATTGTAAGCCCAAAAAGCATTGGATATATATTCCTACGTGGATGTGAGGAATTGTCACATAATTTTTTTCCTTCTATCATTCGGTCTCGGATGTGGCCAACAACGAATCCCCTATCTTATACTCATCCCTTCATGGATATGGAGGATAATAGTTGGGATGAAATTACAGCATTTCTTAGAAGCCTTGCCAATCTCCGAAGTGTTCTGGTGGAATGTGACGCCGAGTTTCATCTATCTGACCAAGTAAAAACTATAGTGGTCGAATATGGTGGAAATATTACAGAATCCGCAATTTCAAAGAATCACCTCAAGTCTTTTCTAACTGGTATTGGAAGATACAAAGAATTCTTCAATACTCTAAACGATAGCATACCTAAGGTATTTGGAAGCAGTGAGTCATGTGATGTTTCTCTCCCAGGTGACAACGATCCTTATTGGTTGGCCCATATGGGTGATGGACATTCTGTTTCTTTCACTGTGCCTCAAGATCGTGTCGTGAAGGGAATGGCTTTGTGTGTAGTTTATTTATCAACCTTCCAAATCATTGAACCTGAACTTAGTACTGTCTTAATTGTTAATTACTCGAAGTGCACATGTCAGATACACAACCATGGCACTGTAATTTCCTTCAATAATGAAGATTGGCCTGACATAATGTCAAATTTAGGATCAGGAGACAAGTTGGAGATTTTTGTGAGTTTGGGTCACGATTTGGTGGTTAAGCACACAACTGTCTATCTTATAAATGAGTTAGAAAAGGAGCCTGTGCCAAAGAACAAATCTCTCCTTAAATTCATAAAGAAAACTCTAATGTGA 2358 0.3762 MICGKEGSGKTTLAKAIYYQLHDTFTEKSFIEEIGQVSGIRENLGLLEQLLSDVLKSKVEIDSFEMGRTMIRERLPGKRVLIVLDDVPELNRQLLWECRHDLGGGSVIIITTRSEILLRIYQADSVLQVKSMNANESLEFLSWHAFRETKPKQEYHLLAERVVSCCGGLPLALEVIGTYLYERTKEEWNSVLLLLNRIHQHNVQWKLKISFDGLRNQMEKDLFLDVCCSFVGKSRTYVTKILNGCGIDADSGIKVLIKHSLIQINKNNKLIMHSLLREMGREIISKISGKEPENSKLWFDKDARYSLLENTLFSSKGTKVIQSLPIGRDFFGRYPLQVRDSTRLLEVAGDSEYHFKNLRWISLGGFSSEYLPNHFYLHDAIAIDLKHSLLRFVWKEPQVLTLLKVLDLSHSKYLIETPDFSGLPSLEQLILKDCPRLRQVHQSIECLCYLTLLNLQDCTNLSNLPRKIYKLKSLKTLILSGCSKIDLMEKDIVGLKSLITIMAENTVTKQLPFTIVSPKSIGYIFLRGCEELSHNFFPSIIRSRMWPTTNPLSYTHPFMDMEDNSWDEITAFLRSLANLRSVLVECDAEFHLSDQVKTIVVEYGGNITESAISKNHLKSFLTGIGRYKEFFNTLNDSIPKVFGSSESCDVSLPGDNDPYWLAHMGDGHSVSFTVPQDRVVKGMALCVVYLSTFQIIEPELSTVLIVNYSKCTCQIHNHGTVISFNNEDWPDIMSNLGSGDKLEIFVSLGHDLVVKHTTVYLINELEKEPVPKNKSLLKFIKKTLM* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0311 785 Pfam NB-ARC domain 2 200 IPR002182 GO:0043531
Pvu10g0311 785 Gene3D - 1 127 IPR027417 -
Pvu10g0311 785 SUPERFAMILY L domain-like 349 581 - -
Pvu10g0311 785 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 3 762 - -
Pvu10g0311 785 Gene3D - 131 215 IPR042197 -
Pvu10g0311 785 SUPERFAMILY "Winged helix" DNA-binding domain 203 303 IPR036390 -
Pvu10g0311 785 CDD AAA 1 120 - -
Pvu10g0311 785 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 762 IPR044974 GO:0006952
Pvu10g0311 785 Gene3D Ribonuclease Inhibitor 340 651 IPR032675 -
Pvu10g0311 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 225 IPR027417 -
Pvu10g0311 785 PRINTS Disease resistance protein signature 74 88 - -
Pvu10g0311 785 PRINTS Disease resistance protein signature 166 180 - -
Pvu10g0311 785 PRINTS Disease resistance protein signature 469 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0311 Pvu-Chr10 4365771 4369561 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0311 414 532 WRKY Transcription Factor Family AT5G45050 33.613 8.44e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0311 - - pvu:PHAVU_010G0291001 1276.15