Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0308 ACTCGATGTTGGAATAATTCGATCGGCCGCCTCTTCCTCTACCACGTCCTCTTCCACGCCAATTTGGTTGGCTCGACTATTCCTTCTCCTTATAGTACCCTTCATGGTTGCTGCCTTTTCCACCATGACCGTTTCCACGACTTCCACGACCACGCCCTCTATATTGAGAATTTTGATGATAGAGTACCTTTTCAAAAACTCCTTTTAGATGTCCTAAATACAAAGGTGAAGACAGATAGCTTTGAGATGGGAAGAAGTATAATTCGGAAAAGACTTTCTGGGAAAACGGTGCTCATTGTACTTGACGATGTGCCTGAGTTTAATGGACAATTACTATGGGAATGCCGTCATTGGGTCGGAGGAGGAAGTGTAATAATTATTACAACAAGACCTGAAAACCTAGTAAAGTTAATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTCGAGAAGCAAAACCAAAACAAGAATACCATTTCCTTGCAGAAAGAGTAGTTTCTTATTGTGAAGGACTACCTCTAGCTCTTGAAGTCATTGGAAATTTATTTCTTGATGTATGTTGTTACTTTGTTGGTAAGAGCAAAACCTATGTTACGAAGATCCTAAATGGTTGTGGAATAGACGCTGATAGTGGAATAAGAGTTCTCATAAAGCATAGTCTCATACAAATTAATAAGAACAACAAATTTGGAATGCATCCGTTGCTACGAGAAATGGGAAGAAAAACTATTCGTCAAATTTCAAGAATTGAAATTGGGAAGAACAGTGAACTGTGGTTTGATAAGGATGCAGAATATGCACTGTGA 816 0.3958 TRCWNNSIGRLFLYHVLFHANLVGSTIPSPYSTLHGCCLFHHDRFHDFHDHALYIENFDDRVPFQKLLLDVLNTKVKTDSFEMGRSIIRKRLSGKTVLIVLDDVPEFNGQLLWECRHWVGGGSVIIITTRPENLVKLMNANESLELLSWHAFREAKPKQEYHFLAERVVSYCEGLPLALEVIGNLFLDVCCYFVGKSKTYVTKILNGCGIDADSGIRVLIKHSLIQINKNNKFGMHPLLREMGRKTIRQISRIEIGKNSELWFDKDAEYAL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0308 271 PRINTS Disease resistance protein signature 91 105 - -
Pvu10g0308 271 PRINTS Disease resistance protein signature 172 186 - -
Pvu10g0308 271 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 60 184 - -
Pvu10g0308 271 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 185 268 - -
Pvu10g0308 271 Pfam NB-ARC domain 76 186 IPR002182 GO:0043531
Pvu10g0308 271 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 185 268 IPR044974 GO:0006952
Pvu10g0308 271 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 184 IPR044974 GO:0006952
Pvu10g0308 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 188 IPR027417 -
Pvu10g0308 271 Gene3D - 38 141 IPR027417 -
Pvu10g0308 271 Gene3D - 142 206 IPR042197 -
Pvu10g0308 271 SUPERFAMILY "Winged helix" DNA-binding domain 184 267 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0308 Pvu-Chr10 4328553 4330784 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0308 86 271 WRKY Transcription Factor Family AT5G45050 29.098 1.03e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0308 - - pvu:PHAVU_010G0294001 548.51