Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0302 ATGGAGTTCACTTCTTCGTCGTCATCATCTTCATCCTTCTCAAAGTCAGGACCCCAGTTCATATACGATGTGTTCATCAACTCTTGGGGAGAAGAAATCTGTAGAAAGTTGGTTTCTCATCTACATTCTCTCCTTTTACAAGCTCAAGTCAAAACTTTGATTAAGGAGGAGAATCTGCAGGAGGGAATAGATCTGGAAGAACACATGCGAGCAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAGTCATACACTGAATCTACCTGCTGCCTTCTTCAGCTTGAAAACATCATTGAATGCCACGAAACATTTGGTCAAATAATTCTTCCCATATTTTACGAGATTGACCCATTGGACGTACGTGATCAGAAGGATGATTTGGGAAAAGCGTTGGAAGAAGCTGCACACAAAAGCTATTCAGGAGAGCAACTGGAGCATGCATTGTCCAGGTGGAGCCGTGCACTCACCACAGCTGCAGGTATCAGTGGTTGGGATGTCAGAGATTTCAGGCATGATGCTGAACTTGTGGAGAAAGTTGTTTTCCGCGTTCTTGAATTGCTGGACTATAAAGACTTGTCTATTACCCAATTTCCTGTTGGATTAGACTCCCGGATGGAAATGGTGATTGGAGGTATTGAAAATCATTGCAGGAAAGTGTGTATGATAGGGATATGGGGAATGGGAGGATCAGGTAAAACTACCATAGCCAAAGCCATCTATAATCGAATTTATCGTCAATTTATTGGTAAGAGTTTTATTGAAAATATTAGAGAAGTTTGGGATCGAGTAGATAAAAGGCATGTTGATTTGCAAGAAAATTTTCTTTATGGTATCCTAAAACCCAAGCTCGAGGTGGAAAGCGTTGGGATGGGAAGTACTATGTTCGAGAATGGACTTTCTCGAAAAAAGTTGCTGATTGTGCTTCATGATGTGATTGAGTTTGGCCAATTAGAAAACCTATGCGGAAATCGTGAATGGTTCGGTCAAGGAACTCTGATAATCATTACAACTAGAGATGTTTATCTACTGAACCGACTCAAAGTTGATTATGTTTATCAAATGGATCATATGAATGAAAATGAGTCTCTTGAGCTTTTTAGTTGGCATGCCTTTAGAGAAGCGAAACCAAGAAAAGACTTCAATGAACTTGCAAGAAACATAGTTGCTCACTGTGGAGGACTACCATTAGTTCTTGAGGTCCTTGGTTCCATTTTATGTAATAAGACAATAAAAGAGTGGGAAAGTCTATCGTTAAAAGCAGAAGTAATTCCCACTAATAAAATTCAAGAGAACTTGAGATTAAGTTTTGACGGTTTATACAATGTCACGGAACAGGATTTATTTCTTGATATATGTTGTTTCTTTATTGGTAAAGAGAGAGGTTATGTGACAGAGATACTAAACGGGTGTGGACTATATGCTGATATTGGAATAACGGTTCTCATAGAACGTGGTCTTATAAAATTTGAAAGGAACAACAAACTTTCAATGCATCCTTTGTTACGAGACATGGGAAGAGAAATTATTCATCAGAGTTGGCCAAATGAACCGGGGAAAAGAAGTCGATTATGGTTTCAGAATGATGTAGAACATGTACTGGAAGAGAATACTGGGACAGAAGCTATCCAGGGACTGTCCCTGAAACTGCATTCAACCAGCAGAGATAGCTTCAAAGCTCATGCTTTCAAGAAAATGAAGAGATTAAGACTGCTACAACTGGATTATGTACAACTTATTGGAGATTATGGATACTTTTCTAAACAATTGAGATGGATTTCTTGGCAAGGGTTTCCTTCCAAGTACATACCAAATAACTTTCATATGGAAAATGTAATTGCAATTAATTTAAAACATAGTCATCTTCAACTCGTCTGGAAACAACCCCAGGTTTTAAAGTGGCTAAAATTCCTTAATCTTAGTCACTCCAAGTTTTTGAGAGAAACACCTGACTTTTCAGGACTACCAAGTCTTGAAAAGCTCATTCTAAAAGATTGCCCAAGTTTGTGCAAGGTACACCAATCCATTGGAGATCTCCAGAATCTAGTACTGATAAATTTGAAAGACTGCACAAGTCTAAGCAATCTGCCCATAGAGTTTTATTTTTCAGAAACAATATCATCTTTGAAGGATTAA 2139 0.3829 MEFTSSSSSSSSFSKSGPQFIYDVFINSWGEEICRKLVSHLHSLLLQAQVKTLIKEENLQEGIDLEEHMRAIAASKIAIIVFSKSYTESTCCLLQLENIIECHETFGQIILPIFYEIDPLDVRDQKDDLGKALEEAAHKSYSGEQLEHALSRWSRALTTAAGISGWDVRDFRHDAELVEKVVFRVLELLDYKDLSITQFPVGLDSRMEMVIGGIENHCRKVCMIGIWGMGGSGKTTIAKAIYNRIYRQFIGKSFIENIREVWDRVDKRHVDLQENFLYGILKPKLEVESVGMGSTMFENGLSRKKLLIVLHDVIEFGQLENLCGNREWFGQGTLIIITTRDVYLLNRLKVDYVYQMDHMNENESLELFSWHAFREAKPRKDFNELARNIVAHCGGLPLVLEVLGSILCNKTIKEWESLSLKAEVIPTNKIQENLRLSFDGLYNVTEQDLFLDICCFFIGKERGYVTEILNGCGLYADIGITVLIERGLIKFERNNKLSMHPLLRDMGREIIHQSWPNEPGKRSRLWFQNDVEHVLEENTGTEAIQGLSLKLHSTSRDSFKAHAFKKMKRLRLLQLDYVQLIGDYGYFSKQLRWISWQGFPSKYIPNNFHMENVIAINLKHSHLQLVWKQPQVLKWLKFLNLSHSKFLRETPDFSGLPSLEKLILKDCPSLCKVHQSIGDLQNLVLINLKDCTSLSNLPIEFYFSETISSLKD* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0302 712 Pfam NB-ARC domain 212 421 IPR002182 GO:0043531
Pvu10g0302 712 Gene3D - 358 442 IPR042197 -
Pvu10g0302 712 Gene3D - 17 195 IPR035897 -
Pvu10g0302 712 SMART till_3 21 163 IPR000157 GO:0007165
Pvu10g0302 712 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 27 703 - -
Pvu10g0302 712 Gene3D - 196 353 IPR027417 -
Pvu10g0302 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 453 IPR027417 -
Pvu10g0302 712 Gene3D Ribonuclease Inhibitor 529 711 IPR032675 -
Pvu10g0302 712 SUPERFAMILY "Winged helix" DNA-binding domain 428 536 IPR036390 -
Pvu10g0302 712 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 703 IPR044974 GO:0006952
Pvu10g0302 712 Pfam TIR domain 22 185 IPR000157 GO:0007165
Pvu10g0302 712 SUPERFAMILY L domain-like 512 702 - -
Pvu10g0302 712 ProSiteProfiles TIR domain profile. 20 189 IPR000157 GO:0007165
Pvu10g0302 712 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 166 IPR035897 -
Pvu10g0302 712 PRINTS Disease resistance protein signature 223 238 - -
Pvu10g0302 712 PRINTS Disease resistance protein signature 300 314 - -
Pvu10g0302 712 PRINTS Disease resistance protein signature 393 407 - -
Pvu10g0302 712 PRINTS Disease resistance protein signature 678 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0302 Pvu-Chr10 4245377 4248629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0302 22 698 WRKY Transcription Factor Family AT4G12020 28.777 4.02e-72 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0302 - - pvu:PHAVU_010G027900g 1077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0302 10 4245377 4248629 Pvu10g0302 10 4245377 4248629 ECH