Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0301 ATGGAATTGGCCTCTTCATCATCCAAAATCCCACAGATGTACGATGTGCTCATCAACTTTAATGGAGAAGACATCCAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCAGACAACCCAATTCACTTCCAACAACCTATTCTCAATCTCTGTCGTGTAGCAATTGTTGTTTTCACCAAATCCTATTCTCAGTCTGCTTGGTGTCTTAATCAGCTTCAACAAATCATCAAATGGCACCAAACTTATTGCCGACATGTTCTGCCCGTTTATTACGAAATCCAGCCATCTGATGTACGTCTTCAGATGGGTGGTTTTGGAAAAGCCTTCAAAGCAACTGCACACCAAACATTCTCACCACAACAACTGAGGCATGGCATGTCCAGATGGAGCCATGCACTCACCAAAGCTGCAAATTTATTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGACAGTTCTTTATTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATTACACATGGAGGATGCGATTCTAACTATCAAATATGAATCCACGGAAGTTTGTATGATATCAATATGTGCAGAGGGAGGATCTGGCAAAACCACCCTTGCCAAAGCCATCTACCATCAAATTCATGGTACATTCGTAGAGAAAAGTTTCATTGAAGGTATTGGGCAATTTAGCGGAATAAGAGGGGATCTTCGTTTACTAGAACAACTCCTTTCAGATGTCCTAAACACGAAGGTAGAGATAGATAGCTTTGAGATGGGAAGAAGTATGATTCGGGAAAGACTTTCTGGTAAAAGGGTGCTCATTGTACTTGACGATATACCTACGTTTAATGGACAATTACTACGGGAATGCTTTCATTGGTTCGGAGGAGGAAGTGTAATAATCATTACAACAAGACCTGAAAACATACTGAGGATATATAAAGCTGATTCTGTTATTCATGTAAAGTTAATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAACAAGAATACCATTTCCTTGCAGAAAGAGTAGTTTCTTATTGTGGAGGAATACCTTTAGCTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACCAAAGATGAATGGAATTCAGTACTGTTACTATTAGACAGTATTCCCCAGCACGATGTTGAATCGAAATTGAGAATAAGTTTCAACGGTTTAAGCAATCAAATGCAAAAAGATTTATTTCTTGATGTATGTTGTTCCTTTGTTGGTAAGAGCAGAACCTATGTCACGAAGATCCTAAATGGCTGTGGAATAGACGCTGATAGTGGAATAAGAGTTCTCATAAAGCATAGTCTCATACAAATTAATAAGAACAACAAATTAATAATGCATCCGTTGCTACGAGAAATGGGAAGAGAAATTATTCGTCATATTTCAACAAATCAACCCTGGAAGAACAGTCAACTGTGGTGGTTTGATAATGATGCAGAATATGCACTGTCAGAGAATACGCTCTTTTCCTCAAAGGGCACAAAAGTCATTCAGAGATTGCCTATCGGAAGAGATTTCGTCAGACACCATCCTTTACGGGTAAGAGACCCATCAAGACTGCTGAAACTCGCTGGAGATTCTGAGTACCATTTTAAGAAACTGAGATGGATCAGTTTTCGAGGGTTTTCTTCAGAATACCTAACTAACCACTTTTATCTGCACGATGCAATAGCCATTGATGTAAAACACAGTCTTCTTCGATTCCTTTGGAAAGAACCCCAGGTTTTGATGTGGCTAAAAGTCCTTGATCTTAGTCACTCCAAGTATTTAATAGAAACCCCTGTCTTTTATGGAACACGAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGATTGAGACAAGTACACCCTTCTATTGGATGTCTCTGCAATCTTATACTGCTAAATTTGCAGGACTGTACAAATCTAAGCAATCTTCCCAAAAAGATATATAAGTTGAAATCCTTAAAAACTCTGATTCTATCTGGTTGTTCGAAGATGGACCTAATGGAAAAAGATATAGTGCGAATGAAATCCTTCATAACTATAATTGCTAAAAATACAGTTATGAAACAATTGCCTTTTACAATTGTAAGCCCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAGGGATTTTCACATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTCGCCAACAATGAATCCCCTATCTTATATTCATTCCTTTATGCATATGGAAGATAATAATTGGGATGATATATCACCATTGCTTAGCAGCCTCACAAATCTTCGAAGTGTTTCGGTGCAATGTGATGCCGAGTTTCAACTATCTGAGCAAGTAAAAACCATAGTGGCCGAATATGGTGCAAATGTTAGAGAATCAGTTCTTTCAAAGCATCACGTAAGGTATTCTCTGACTGGTGTTGGAAGATACAAAGAATTCTTCAATACTGTGAGCGATATCATACCTAAGGTATTTGCAAGCAGTGAGTCATGTGATGTTACTCTCCCAGGTGACAATGATCCTTATTGGTTGGCCCATATGGGTAATGGACATTATGTTTCTTTCACTGTGCCACAACATCGTGTGGTGAAGGGAATGGCTTTGTGTGTTGTTTATTTATCAACCTCCGAAATCATTGAACCTGAACTTACTACTGTCTTAATTGTTAATTACACGAAGTGCACATGCCAAATACACAATCATGGCACAGGAATTTCCTTTAATGATGAAGATTGGCATGACATATTGTCAAGTTTAGGATCAGGTGACAAGGTGGAGATTTTTGTGAATTTTGGTCACGATTTGGTGATTAAGAACACAGCTGTCTATCTGATATGTTGTGAATCAAATGACTAG 2946 0.3859 MELASSSSKIPQMYDVLINFNGEDIQRKFVSHLDSALSAVGFTTFLHHPNADNPIHFQQPILNLCRVAIVVFTKSYSQSAWCLNQLQQIIKWHQTYCRHVLPVYYEIQPSDVRLQMGGFGKAFKATAHQTFSPQQLRHGMSRWSHALTKAANLFGWDESNYRSDAELVDKIVKTVLYLPVLSATKFPVGLQLHMEDAILTIKYESTEVCMISICAEGGSGKTTLAKAIYHQIHGTFVEKSFIEGIGQFSGIRGDLRLLEQLLSDVLNTKVEIDSFEMGRSMIRERLSGKRVLIVLDDIPTFNGQLLRECFHWFGGGSVIIITTRPENILRIYKADSVIHVKLMNANESLELLSWHAFREAKPKQEYHFLAERVVSYCGGIPLALEVIGSYLYERTKDEWNSVLLLLDSIPQHDVESKLRISFNGLSNQMQKDLFLDVCCSFVGKSRTYVTKILNGCGIDADSGIRVLIKHSLIQINKNNKLIMHPLLREMGREIIRHISTNQPWKNSQLWWFDNDAEYALSENTLFSSKGTKVIQRLPIGRDFVRHHPLRVRDPSRLLKLAGDSEYHFKKLRWISFRGFSSEYLTNHFYLHDAIAIDVKHSLLRFLWKEPQVLMWLKVLDLSHSKYLIETPVFYGTRSLEQLILKDCPRLRQVHPSIGCLCNLILLNLQDCTNLSNLPKKIYKLKSLKTLILSGCSKMDLMEKDIVRMKSFITIIAKNTVMKQLPFTIVSPKSIGYISLRGFEGFSHNLFPSIIRSRMSPTMNPLSYIHSFMHMEDNNWDDISPLLSSLTNLRSVSVQCDAEFQLSEQVKTIVAEYGANVRESVLSKHHVRYSLTGVGRYKEFFNTVSDIIPKVFASSESCDVTLPGDNDPYWLAHMGNGHYVSFTVPQHRVVKGMALCVVYLSTSEIIEPELTTVLIVNYTKCTCQIHNHGTGISFNDEDWHDILSSLGSGDKVEIFVNFGHDLVIKNTAVYLICCESND* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0301 981 Gene3D - 343 426 IPR042197 -
Pvu10g0301 981 Gene3D - 11 181 IPR035897 -
Pvu10g0301 981 Pfam TIR domain 14 175 IPR000157 GO:0007165
Pvu10g0301 981 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Pvu10g0301 981 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 973 IPR044974 GO:0006952
Pvu10g0301 981 SMART till_3 13 153 IPR000157 GO:0007165
Pvu10g0301 981 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 973 - -
Pvu10g0301 981 Pfam NB-ARC domain 204 423 IPR002182 GO:0043531
Pvu10g0301 981 PRINTS Disease resistance protein signature 210 225 - -
Pvu10g0301 981 PRINTS Disease resistance protein signature 285 299 - -
Pvu10g0301 981 PRINTS Disease resistance protein signature 377 391 - -
Pvu10g0301 981 PRINTS Disease resistance protein signature 682 698 - -
Pvu10g0301 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 435 IPR027417 -
Pvu10g0301 981 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Pvu10g0301 981 SUPERFAMILY L domain-like 484 796 - -
Pvu10g0301 981 Gene3D Ribonuclease Inhibitor 557 815 IPR032675 -
Pvu10g0301 981 Gene3D - 188 339 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0301 Pvu-Chr10 4194497 4198156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0301 14 698 WRKY Transcription Factor Family AT4G12020 27.348 1.23e-55 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0301 - - pvu:PHAVU_010G0291001 1310.05