Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0300 ATGGAATTGGCGTCTTCATCATCCAAACTCCCACGGATGTATGATGTGCTCATCAACTTCAATGGAGAAGACATCCAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTTGCTTCACCACTTTCCTTCACCACCCCAGTGCAGACAACCCACATCACATCCAACAACCTGTTCTCAATCTCTGTCGGGTAGCGATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTGATCAGCTCCAACAAATCATTAAATGGCACCAATCTTACTGCCGACATGTTCTGCCTGTTTATTACGAAATTGAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCACACCAAACATTTTCAGCAGAACAACTGGAGCATGCCATATCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGTGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGACCGTTCTTCATTTTCCAGTATTGTCTGCTACTAAATTTCCAGTTGGATTACAATCGCACGTAGAGGATCTGATTCGAACTATCAAAAATAAATCCACAAAAGTTTGTACGATAGCGATATATGGAAAGGAAGGATCTGGTAAAACAACCCTTGCTAAAGCAATCTACTATCAACTTCATGATACATTCACGGAGAAAAGTTTCATTGAAGAGATTGGACAAGTTAGCGGAATAAGAGAGAATCTTGGTTTACTAGAACAACTCCTTTCAGATGTCCTAAAATCAAAGGTAGAGATACATAGCTTTGAGATGGGAAGAACTATGATTCGGGAAAGACTTCCTGGAAAAAGAGTGCTCATTGTACTTGACGATGTGCCTGAGCTTAATAGACAATTACTATGGGAATGCCGTCATAAGTTAGGAGGAGGAAGTGTAATAATCATTACAACAAGATCTGAAATCTTACTGAGGATATATAAAGCTGATTCTATTTTTCATGTAGAGTCAATGAACGCCAAGGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAAAAAAACCAAAACAAGAATACCATCTCCTTGCAGAAAGTGTAGTTTGGTATTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACCAAAGAAGAATGGAATTCAGTATTGTTAAGATTAGACAATATTCCCCAGCACGATCTTCAAAGGAAATTGAAAATAAGTTTCGACCGTTTACGCAATCAAATGGAAAAAGATTTATTTCTTGATGTATGTTGTTCCTTTGTTGGTAAGAGCAGAACCTATGTTACGAAGATTCTAAATGGCTGTGGAATAGACGCTGATAGTGGAATAAGAGTTCTCATAAAGCATAGTCTCATACAAATTAATAAGAACAACAAATTAATAATGCATTCGTTGCTACGAGAAATGGGAAGAGAAATTATTTATCAAATTTCAGGAGAAGAACCTGAGAAGAACAGTAAACTGTGGTTTGATAAGGATGCAAGATATTCACTGTCAGAGAATACGCTCTTTTCATCTAAGGGCACAAAAGTCATTCAGAGTTTGCCTATCGGAATAGATTTCTTTGGACGCTATCCTTTACAGGTAAGAGAGTCATCAAGACTGCTGGAAGTCGCTGGAGATTCTGAGTACCATTTTAAGAATCTGAGATGGATTAGTTTGGGAGGGTTTTCTACAGAATACCTACCTAACCACTTTTGTCTGCATGATGCAATAGCCATTGATGTAAAACACAGTCTTCTTCGATTCCTTTGGAAAGAACCTCAGGTTTTGACGCTGCTAAAAGTCCTTGATCTCAGTCACTCAAAGTATTTGATAGAAACCCCTGATTTTTCCGGACTCCCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGATTGTGCCAAGTACACCAATCTATTGAATGTCTCTGCTATCTTACATTGCTAAATTTGCAGGACTGTACAAATCTAAGCAATCTCCCCAGAAAGATATATAAGTTGAAATCCTTAAACACTCTGATTTTATCTGGTTGTTCGAAGATTGACTTAATGGAAAAAGATATAGTGGGATTGAAATCCTTGATAACTATAATGGCTGAAAATACAGTTACTAAACAATTGCCTTTTACAATTGTAAGCCCAAAAAGCATTGGATATATATTCCTACGTGGATGTGAGGAATTGTCACATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTGGCCAACAATGAATCCCCTATCTTATATTCATCTCTTCATGGATATGGAGGATAATAGTTGGGATGAAATTGCAGCATTTCTTAGAAGCCTTGCCAATCTCCGAAGTGTTCTGGTGGAATGTGACGTCGAGTTTCATCTATCTGAACAAGTAAAAAGTATAGTGGTCGAATATGGTGGAAATATTACAGAATCAGATATTTCAAAGAATCACCTCAAGTCTTTTCTGACTGGCATTGGAAGATACAAAGAATTCTTCAATACTCTAAGCGATAGCATACCTAAGGTATTTGCAAGCAGTGAGTCATGTGATGTTTCTCTCCCAGGTGACAATCTTCCTTATTGGTTGGCCCATATGGGTGATGGACATTCTGTTTATTTCACTGTGCCTCAAGATCGTGTCGTGAAGGGAATGGCTTTGTGTGTAGTTTATTTATCAACCTTCGAAATCATTGAACCTGAACTTATTACTGTCTTAATTGTTAATTACACGAAGTGCACATGTCAGATACACAACCATGGCACAGTAATTTCCTTCAATAATGAAGATTGGCCTGACATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGAGTTTTGGTCACGATTTGATGGTTAAGAACACAACTGTCTATCTGATATGTAGTGAAGCAAATGACTTAGAAAAGGAGCCTGTACCAAAGAAAAATCTCTCCTTAAATTCATAA 2988 0.3822 MELASSSSKLPRMYDVLINFNGEDIQRKFVSHLDSALSAVCFTTFLHHPSADNPHHIQQPVLNLCRVAIVVFTKTYSQSAWCLDQLQQIIKWHQSYCRHVLPVYYEIEPSDVRLQKGDFGKAFKATAHQTFSAEQLEHAISRWSHALTKAANFFGCDESNYRSDAELVDKIVKTVLHFPVLSATKFPVGLQSHVEDLIRTIKNKSTKVCTIAIYGKEGSGKTTLAKAIYYQLHDTFTEKSFIEEIGQVSGIRENLGLLEQLLSDVLKSKVEIHSFEMGRTMIRERLPGKRVLIVLDDVPELNRQLLWECRHKLGGGSVIIITTRSEILLRIYKADSIFHVESMNAKESLELLSWHAFREKKPKQEYHLLAESVVWYCGGLPLALEVIGSYLYERTKEEWNSVLLRLDNIPQHDLQRKLKISFDRLRNQMEKDLFLDVCCSFVGKSRTYVTKILNGCGIDADSGIRVLIKHSLIQINKNNKLIMHSLLREMGREIIYQISGEEPEKNSKLWFDKDARYSLSENTLFSSKGTKVIQSLPIGIDFFGRYPLQVRESSRLLEVAGDSEYHFKNLRWISLGGFSTEYLPNHFCLHDAIAIDVKHSLLRFLWKEPQVLTLLKVLDLSHSKYLIETPDFSGLPSLEQLILKDCPRLCQVHQSIECLCYLTLLNLQDCTNLSNLPRKIYKLKSLNTLILSGCSKIDLMEKDIVGLKSLITIMAENTVTKQLPFTIVSPKSIGYIFLRGCEELSHNLFPSIIRSRMWPTMNPLSYIHLFMDMEDNSWDEIAAFLRSLANLRSVLVECDVEFHLSEQVKSIVVEYGGNITESDISKNHLKSFLTGIGRYKEFFNTLSDSIPKVFASSESCDVSLPGDNLPYWLAHMGDGHSVYFTVPQDRVVKGMALCVVYLSTFEIIEPELITVLIVNYTKCTCQIHNHGTVISFNNEDWPDIMSNLGSGDKVEIFVSFGHDLMVKNTTVYLICSEANDLEKEPVPKKNLSLNS* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0300 995 PRINTS Disease resistance protein signature 210 225 - -
Pvu10g0300 995 PRINTS Disease resistance protein signature 285 299 - -
Pvu10g0300 995 PRINTS Disease resistance protein signature 377 391 - -
Pvu10g0300 995 PRINTS Disease resistance protein signature 610 626 - -
Pvu10g0300 995 SMART AAA_5 207 344 IPR003593 -
Pvu10g0300 995 Gene3D - 174 337 IPR027417 -
Pvu10g0300 995 Gene3D Ribonuclease Inhibitor 550 864 IPR032675 -
Pvu10g0300 995 Pfam TIR domain 14 182 IPR000157 GO:0007165
Pvu10g0300 995 SUPERFAMILY "Winged helix" DNA-binding domain 415 516 IPR036390 -
Pvu10g0300 995 SMART till_3 13 153 IPR000157 GO:0007165
Pvu10g0300 995 Gene3D - 7 173 IPR035897 -
Pvu10g0300 995 SUPERFAMILY L domain-like 562 830 - -
Pvu10g0300 995 Pfam NB-ARC domain 191 415 IPR002182 GO:0043531
Pvu10g0300 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 436 IPR027417 -
Pvu10g0300 995 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Pvu10g0300 995 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 974 IPR044974 GO:0006952
Pvu10g0300 995 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Pvu10g0300 995 CDD AAA 188 342 - -
Pvu10g0300 995 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 974 - -
Pvu10g0300 995 Gene3D - 342 426 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0300 Pvu-Chr10 4183725 4187624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0300 612 727 WRKY Transcription Factor Family AT4G12020 34.483 1.01e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0300 - - pvu:PHAVU_010G0291001 1361.28