Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0299 ATGGAGTTCGCTTCTTCTTCATCATCATCGTCTTCATCCTTCTTAAGATCAGAACCCCAGTTCACATACGACGTGTTCATCAACTCTTGGGGAGAAGAAATCGGTAGAAAGTTGGTTTCTCATCTTCATTCTTTCCTTTTACAAGCTAAAGTAAAAACTTTGATTAAGGAGGAGAATCTGCAGGAGGGAATGGGGCTGGAAGAACACATGCGAGAAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAATCATACACTGAATCTTACCAAAATGGAAGCCATGTTGATGTGCAAGAAAATCTTCTATATAATGTCCTAAAATCCAAGCTTGAGGTGGAAAGCGTTGGGATGGGAAGAACTATGATCGAGAATGGACTTTCTCGGAAAAAGTTGATGATTGTGCTTGATGATGTGAATGGGACAGAAGCTATCCAGGGATTGTCTCTGAAACTGCATTCAACCAGCAGAGATTGCTTCAAAGCTCATGCTTTCAGGGAAATGAAGGGATTAAGACTGCTACAACTGGATCATGTACAACTTACTGGAGATTATGGGTACATTTCTAAACAATTGAGATGGATTTCTTGGCAAGGGTTTCGTTCTAAGTACATACCAAACAACTTTCGTATGGAAAATGTAATTGCAATTGATTTAAAACATAGTCATCTTCAACTCGTCTGGAAACAACCCCAGGTTTTAAAGTGGCTAAAATTCCTTAATCTTAGTCACTCCAAGTTCTTGAGAGAAACACCTGACTTTTCAGGACTACCAAGTCTTGAAAAGCTCATTCTAAAAGATTGCCCAAGTTTGTGCAAGGAACACCAAACCATTGGAGATCTCCGAAATCTAATACTGATAAATTTGAAAGACTGCACAAGTCTAAGAAATCTCCCCAGAGAGATATATAAGTTGAAATCTTTAAGAACTTTCATCCTCTCTGGTTGTTTCAAGATTAAAATTTTGGAAGAAGATATAGCGCTGATGAAATCCTTGATAACTCTCGTTGCTGAAAATACAGCTGTGAAACAAGTGTCTTAA 1044 0.3831 MEFASSSSSSSSSFLRSEPQFTYDVFINSWGEEIGRKLVSHLHSFLLQAKVKTLIKEENLQEGMGLEEHMREIAASKIAIIVFSKSYTESYQNGSHVDVQENLLYNVLKSKLEVESVGMGRTMIENGLSRKKLMIVLDDVNGTEAIQGLSLKLHSTSRDCFKAHAFREMKGLRLLQLDHVQLTGDYGYISKQLRWISWQGFRSKYIPNNFRMENVIAIDLKHSHLQLVWKQPQVLKWLKFLNLSHSKFLRETPDFSGLPSLEKLILKDCPSLCKEHQTIGDLRNLILINLKDCTSLRNLPREIYKLKSLRTFILSGCFKIKILEEDIALMKSLITLVAENTAVKQVS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0299 347 SUPERFAMILY L domain-like 159 343 - -
Pvu10g0299 347 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 91 IPR035897 -
Pvu10g0299 347 Gene3D Ribonuclease Inhibitor 120 346 IPR032675 -
Pvu10g0299 347 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 144 346 - -
Pvu10g0299 347 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 96 149 - -
Pvu10g0299 347 ProSiteProfiles TIR domain profile. 21 170 IPR000157 GO:0007165
Pvu10g0299 347 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 144 346 IPR044974 GO:0006952
Pvu10g0299 347 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 96 149 IPR044974 GO:0006952
Pvu10g0299 347 Gene3D - 16 93 IPR035897 -
Pvu10g0299 347 Pfam TIR domain 23 91 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0299 Pvu-Chr10 4161096 4163176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0299 236 346 WRKY Transcription Factor Family AT4G12020 32.824 1.41e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0299 - - pvu:PHAVU_010G028600g 675.241